Oryza glaberrima (African rice): 127776491
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Entry
127776491 CDS
T08853
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127776491
03012 Translation factors [BR:
ogl03012
]
127776491
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127776491
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127776491
mRNA cycle factors
Stress granule specific factors
127776491
Translation factors [BR:
ogl03012
]
Eukaryotic type
Initiation factors
eIF-4
127776491
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127776491
Exosomal proteins of bladder cancer cells
127776491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
127776491
NCBI-ProteinID:
XP_052158841
UniProt:
I1Q4Z1
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All DBs
Position
6:complement(27854615..27858035)
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AA seq
414 aa
AA seq
DB search
MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
PDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatggcaccagagggatcccagtttgatgctaagcactatgattctaaaatg
caggagcttctgaaccaaggtgaaaccgaggagttcttcacatcttatgatgaagttcat
gagagttttgatgacatgggtctccaagagaaccttctcagaggcatctatgcctatggt
ttcgagaagccttcagccattcagcaaaggggtattgtccctttctgcaagggtcttgat
gtgattcagcaagctcagtcaggaacaggaaagactgccaccttctgttctggaattttg
cagcaacttgactatgctgtggttgagtgccaggccttggtccttgctcctactcgtgag
cttgcacagcaaattgagaaagtcatgcgcgcacttggtgactatctgggtgtgaaggtt
catgcttgtgttggaggtacttctgttcgtgaggaccaaaggattcttgcaagtggagtg
catgttgttgttggaacacctggtcgtgtgtttgacatgctgcgtaggcagtccctccgt
cctgattacatcaagatgtttgtccttgatgaagctgatgaaatgctttctcgtggtttc
aaggatcagatttatgatatcttccagctcctcccgtcaaagatccaagttggtgtgttc
tctgctacaatgccccctgaggcccttgagatcacccgtaaattcatgaacaagcctgtg
cggatccttgtgaagagggatgagctcactcttgagggtatcaaacagttttatgtcaat
gtggagaaggaagaatggaagcttgacacactctgtgacctgtatgagacactggccatc
acgcagagtgtcatctttgtgaacacccgccgcaaggtggactggctcactgataagatg
aggggcagggatcacacagtttctgctacccatggtgacatggaccagaacactagggac
atcatcatgagggagttccgatctggttcttcccgtgtgctcattaccacggaccttctt
gcccgtggtattgatgtccagcaggtgtcccttgtcatcaactatgatctgccgacccaa
cctgagaactacctgcatcgcattggtcgtagtggtcgttttggtaggaaaggtgttgcc
attaactttgtgacccgtgacgatgagaggatgctgtttgacatccagaggttctacaat
gtggtgattgaggagctgccggccaacgtcgctgaccttctgtga
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