Oryza glaberrima (African rice): 127776572
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Entry
127776572 CDS
T08853
Name
(RefSeq) putative cellulose synthase-like protein D5
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogl01003
]
127776572
Glycosyltransferases [BR:
ogl01003
]
Polysaccharide
Structural polysaccharide
127776572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
127776572
NCBI-ProteinID:
XP_052158947
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All DBs
Position
6:17145080..17148717
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AA seq
1013 aa
AA seq
DB search
MSGDYANYTVLMPPTPDNQPSGGAPPAAPSAGGARPGDLPLPPYGSSSSSRLVNRRGGGD
DGAKMDRRLSTARVPAPSSNKSLLVRSQTGDFDHNRWLFETKGTYGIGNAYWPQDNVYGD
DGGGGGAVKMEDLVEKPWKPLSRKVPIPPGILSPYRLLVLVRFVALFLFLVWRVTNPNMD
ALWLWGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGL
DVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKV
WVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDEFKIRVNSLPDLIR
RRANALNARERKLARDKQAAGDADALASVKAATWMADGTHWPGTWLDPSPDHAKGDHASI
VQVMIKNPHHDVVYGEAGDHPYLDMTDVDMRIPMFAYLSREKRAGYDHNKKAGAMNAMVR
ASAILSNGPFMLNFDCDHYIYNCQAIREAMCYMLDRGGDRICYIQFPQRFEGIDPSDRYA
NHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAIYGFNPPRAIEYRGTYGQTKVPIDPRQ
GSEAMPGAGGGRSGGGSVGGDHELQALSTAHPDHEAPQKFGKSKMFIESIAVAEYQGRPL
QDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVV
TGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLASRR
LKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLML
LCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAED
DDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVL
AHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISPPDDSVAQGGIDV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgactacgccaactacaccgtcctcatgccgcccaccccggacaaccagccg
tccgggggtgccccgcccgcggcgccgtccgccggtggcgctaggccgggcgatctgccg
ctcccgccctatggctcgtcgtcctcctccaggctcgtcaaccggcgcggtggcggcgac
gacggcgccaagatggaccggcggctgtcgacggcgcgcgtcccggcgccgtccagcaac
aagtcgctgctggtgcgcagccagaccggtgacttcgatcacaaccggtggctgttcgag
accaagggcacgtacggcatcgggaacgcctactggccccaggacaacgtgtacggcgac
gacggcggaggcggcggcgccgtcaagatggaggacctcgtcgagaagccgtggaagccg
ctgagccgcaaggtgcccatccctccgggcatcctcagcccctacaggctgctggtgttg
gtgcggttcgtggcgctcttcctcttcttggtgtggcgcgtcaccaaccctaacatggac
gcgctctggctgtgggggatctccatcgtgtgcgagttctggttcgccttctcctggctg
ctcgaccagatgcccaagctgaacccgatcaaccgcgccgccgacctcgccgcgctcaag
gagaagttcgagtcgccgtcgccgacgaacccgacggggcgctccgacctgccggggctt
gacgtcttcatctccaccgccgacccctacaaggagccgacgctggtgacggccaacacg
ctcctctccatcctcgccaccgagtaccccgtggagaagctgttcgtctacatctccgac
gacggcggcgcgctgctgaccttcgagtccatggcggaggcgtgcgcgttcgccaaggtg
tgggtgcccttctgccgcaagcacagcatcgagccgcgcaacccggattcctacttcacg
cagaagggcgacccgaccaagggcaagaagcggccggacttcgtcaaggaccgccgctgg
atcaagcgcgagtacgacgagttcaagatccgcgtgaacagcctccccgacctcatccgc
cgccgcgccaacgccctgaacgcccgcgagcgcaagctggcgcgcgacaagcaggccgcc
ggcgacgccgacgcactcgcctccgtgaaggccgccacctggatggccgacggcacgcac
tggccgggcacctggctggacccgtcccccgaccacgccaagggcgaccacgccagcatc
gtgcaggtgatgatcaagaacccgcaccacgacgtggtgtacggcgaggccggcgaccac
ccgtacctggacatgaccgacgtggacatgcgcatcccgatgttcgcctacctgtcgcgg
gagaagcgcgccgggtacgaccacaacaagaaggccggcgccatgaacgccatggtgcgg
gcgtcggcgatcctctccaatggccccttcatgctcaacttcgactgcgaccactacatc
tacaactgccaggccatccgcgaggccatgtgctacatgctcgaccgcggcggcgaccgc
atctgctacatccagttcccgcagcggttcgaggggatcgacccctccgaccgctacgcc
aaccacaacaccgtcttcttcgacggcaacatgcgcgcgctcgacggcctccagggcccc
atgtacgtcggcacgggctgcctcttccgccgctacgccatctacggcttcaacccgccc
cgcgccatcgagtaccgcggcacctacggccagaccaaggtgcccatcgacccgcgacaa
ggcagcgaagccatgcccggcgccggcggcggccgcagcggcggcggcagcgtgggcggc
gaccacgagctgcaggcgctgtcgacggcgcacccggaccacgaggcgccgcagaagttc
ggcaagtccaagatgttcatcgagtccatcgcggtggccgagtaccaggggcggccgctg
caggaccacccgtccgtcctgaacggtcgcccccccggcgcgctgctgatgccgcggccg
ccgctggacgcggcgacggtggcggagtcggtgtcggtgatctcgtgctggtacgaggac
aacacggagtgggggcagcgcgtggggtggatctacgggtcggtgacggaggacgtggtg
accgggtaccggatgcacaaccgcgggtggcggtcggtgtactgcatcacccggcgcgac
gcgttccgcgggacggcgccgatcaacctgacggacaggctgcaccaggtgctccggtgg
gcgacggggtcggtggagatcttcttctccaagaacaacgcggtgctggcgtccaggcgg
ctcaagttcctgcagcggatggcgtacctcaacgttgggatctaccccttcacgtcgctc
ttcctcatcatgtactgcctcctcccggcgctgtcgctcttctcggggcagttcatcgtg
gcgacgctggacccgacgttcctctcctacctgctgctcatcaccatcaccctcatgctg
ctctgcctgctggaggtgaagtggtccgggatcgggctggaggagtggtggcggaacgag
cagttctgggtgatcggcggcacgtcggcgcacctggcggcggtgctgcagggcctgctc
aaggtggtggccgggatcgagatctccttcacgctcacggccaaggcggcggcggaggac
gacgacgaccccttcgccgagctctacctcatcaagtggacgtcgctcttcatcccgccg
ctcgccgtcatcgggatcaacatcatcgcgctcgtcgtcggcgtgtcgcggacggtgtac
gcggagatcccgcagtacagcaagctgctcggcggcggcttcttcagcttctgggtgctc
gcgcactactacccgttcgccaagggcctcatgggccgccgcggcaggacgcccaccatc
gtctacgtctgggccggcctcatctccatcaccgtctccctcctctggatcaccattagc
cccccggatgatagcgtcgcgcagggcggcatcgacgtgtga
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