Oryza glaberrima (African rice): 127776633
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Entry
127776633 CDS
T08853
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00040
Pentose and glucuronate interconversions
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127776633
Enzymes [BR:
ogl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127776633
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
127776633
NCBI-ProteinID:
XP_052159078
UniProt:
I1PZH5
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All DBs
Position
6:complement(2437067..2439076)
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AA seq
450 aa
AA seq
DB search
MAGSVVTRSQLCSILFYVLATAAAATATATATLVGNITVDEEYWAKRSEVARSFNRAAYV
SDPVAVLNRFNEDVLNTTTATAAAARRSLMRRYRRRGPCTVTNPIDRCWRCRKNWASRRK
RLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMVI
RLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSKHH
FGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVMLF
GAHDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNPTI
ISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQDDLFLNGAFFNESGGRNERRYNR
LDLIQARNGRYVGRMTRFAGTLPCRVGKKC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctccgtcgtgacgaggagccaactgtgctccatcctcttctacgtcctcgcc
acggccgctgcggcgacggcgacggcgacggcgacgcttgtgggcaacatcaccgtcgac
gaggagtactgggccaagcgctccgaggtggcgcgctcgttcaaccgcgccgcctacgtc
agcgaccccgtcgccgtgctgaacaggttcaacgaggacgtgctgaataccacgacggcg
acggcggcggcggcgcggcggtcgctgatgaggaggtaccggcgtcgtggcccgtgcacg
gtgacgaacccgatcgaccggtgctggcgctgccgcaagaactgggcgagccgtcgcaag
cggctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaag
atctacatcgtgacggacgccggcgacgagcacctcgtcatccctcggcggggcacgctc
cggcacgccgtgatccaggagcggccgctgtggatcgtcttcgcgcggagcatggtgatc
aggctcgccaaggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcag
gtgcacgtcaccggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaac
ctccacatccacaactccgtgccgcgctccggcggcctcatccgcgactccaagcaccac
ttcggcatccgcggcgagagcgacggcgacggcatctccgtcatgggctccagcaacatc
tggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacatcaccgacggc
tccaccgccatcaccatctccaactcccacttcaccaagcacgatcacgtgatgctgttc
ggtgcacacgacgactcgccgaaggacaagatcatgcaggtaacgctggcattcaaccac
tttggcaaggggctcgtgcagaggatgccgaggtgcaggtttggattcttccacatggtg
aacaacgactacacgcactggctcatgtacgccatcggcggcaacatgaacccgacgatc
atcagccaggggaacaggttcagggcaagcgacgacatgaagctcaaggaggtgaccaag
agagagtacacgagctacgacgagtacaaggagtgggtgtggaagtcgcaggacgacctc
ttcctcaacggcgccttcttcaacgagtccggcggccggaacgagcgccggtacaaccgg
ctcgacctcatccaggccaggaacggccgctacgtcggccggatgaccaggttcgccggc
acgctgccatgccgtgtcggcaagaaatgctag
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