Oryza glaberrima (African rice): 127776713
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Entry
127776713 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127776713
KO
K18735
protein SMG9
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127776713
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127776713
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
RsgA_GTPase
ABC_tran
AAA_29
Dynamin_N
AAA_16
AAA_18
Motif
Other DBs
NCBI-GeneID:
127776713
NCBI-ProteinID:
XP_052159196
UniProt:
I1PYX6
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Position
6:929731..932968
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AA seq
412 aa
AA seq
DB search
MAAGAPPLAGVGDRGSSSSSSHPPPPPPPKILLAKPPLPPPSSSGADDDGGGGGGAGRSR
QATQPGSLSLVSDAWEVHTDKILPYLTENNDFMVIGVIGPTGVGKSTIMNELYGYDGSSP
GMLPPFATQTEEIKAMAKHCTAGIDIRISNERVILLDTQPVFSPSVLIDMMKPDGSSAIP
ILSGDPLSGDLAHELMGIQLGVFLASVCNILLVVSEGINDLSMWDLILTVDLLKHNIPDP
SLLTSSTTQDKENKNDNQSGIEDYIADLCFVHARLREQDFSPSKLMVLKRVLEKHFKSSS
FSIGSSGATPQVSDSSVPSSMKIEDLSSNQQDIYLLPLRTPDNSTNFEYRTCPSMLGMLR
DQILSRPSRSFSKNLTERDWLRSSAKIWDMVKKSPVISEYCKTLQDSGVFRN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggagcgccgccgctcgccggcgtcggagaccggggctcctcctcctcctcc
tcgcacccgcctccgcctccccctcccaagatccttctcgccaagcccccgcttccgccc
ccctcgtcctccggcgccgacgacgacggcggcggcggaggaggcgcgggccgctcgcgg
caggccacgcagcctggctcgctcagcctcgtctccgacgcgtgggaggtccacaccgac
aagatcctcccgtatttgactgagaacaatgatttcatggtgattggagtaattggtcca
actggtgtgggcaagtcaaccatcatgaacgagctttatggatatgatggaagctcacct
ggaatgcttcctccttttgctacacaaactgaggaaatcaaagcaatggctaagcactgt
actgctggcattgatatcaggatctctaatgaacgggttatacttctagacactcagcca
gtattcagtccctccgtactaattgatatgatgaagccagatggttcatccgcaattcct
atcctcagtggtgatccattatcaggagacctggctcatgagttaatgggaatccagctt
ggtgttttcttggcatctgtttgcaatattttgttggttgtatcggaggggattaatgac
ctgtccatgtgggacctcattcttacggttgatttactgaagcacaacatacctgatcca
tcattattgacctcctcaactacccaagacaaggaaaacaaaaatgataaccaatcaggc
attgaagattacatagctgatctctgttttgtgcatgctagattgcgggaacaagacttt
tctccttcaaagctcatggttctgaagagggttcttgaaaaacacttcaagtcctcctcc
tttagcattggaagctctggagcaacacctcaagtttctgactcctcagttccttcaagc
atgaagattgaggatctgagctccaatcagcaggacatatatcttcttccattaagaaca
cctgataactcaacaaattttgagtatcggacatgtccatccatgttagggatgcttcgt
gatcagatcttatcaaggccatcgaggtcattctcgaagaatctcaccgagcgtgactgg
ttgaggagctcagcgaagatctgggacatggtgaagaaatctcctgtcatctcagaatat
tgcaaaacacttcaggattcaggggttttcagaaattag
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