Oryza glaberrima (African rice): 127776767
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Entry
127776767 CDS
T08853
Name
(RefSeq) chitinase 1
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00520
Amino sugar and nucleotide sugar metabolism
ogl01100
Metabolic pathways
ogl04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
127776767
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
127776767
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
127776767
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Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
127776767
NCBI-ProteinID:
XP_052159272
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Position
6:28932022..28933291
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AA seq
349 aa
AA seq
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MRSHRFLTSLQLSSKQANSILLCIATMRALAVVVVATAFAVVAVRGEQCGSQAGGALCPN
CLCCSQYGWCGSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLH
RNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPD
GPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSN
LLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVT
NIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPFNS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcccaccgcttcttaacatcactgcaactcagcagcaagcaagctaactccatt
ttactttgcattgccaccatgagagcgctcgccgtggtcgtggtggccacggcctttgcg
gtggtggccgtgcgcggcgagcagtgcggcagccaggccggcggcgcgctctgccccaac
tgcctctgctgcagccagtacggctggtgcggatccacctccgcctactgcggctccggc
tgccagagccagtgctccggcagctgcggcggcggcggcccgaccccgccctccggcggt
ggcggcagcggcgtcgcctccatcgtgtcgcgctcgctcttcgaccagatgcttctccac
cgcaacgacgcggcgtgcccggccaagaacttctacacctacgacgccttcgtcgccgcc
gccaacgccttcccgagcttcgccacaaccggcgacgccgccacccgcaagcgcgaggtc
gccgcgttcctggcgcagacgtcgcacgagaccacgggcgggtgggcgacggcgcccgat
ggcccctactcgtggggctactgcttcaaggaggagaacaacggcaacgttgggtccgac
tactgtgtccagagctcgcagtggccgtgcgccgccggcaagaagtactacggccgggga
cccatccagatctcctacaactacaactacggcccggcggggcaggccatcggctccaac
ctgctgagcaacccggacctggtggcgtcggacgccaccgtctccttcaagacggcgttc
tggttctggatgacgccgcagtcacccaagccgtcgtgccacgcggtgatgacagggcag
tggacgcccaacggcaacgaccaggcggcggggcgcgtgccgggctacggcgtggtgacc
aacatcatcaacggcggcgtggagtgcggccacggcgcggacagcagagtcgccgaccgg
attgggttctacaagcgctactgcgacatgttgggcgtcagctacggcgccaacttggac
tgctacaaccagaggcctttcaactcctaa
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