Oryza glaberrima (African rice): 127777035
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Entry
127777035 CDS
T08853
Name
(RefSeq) LOW QUALITY PROTEIN: flocculation protein FLO11-like
Organism
ogl
Oryza glaberrima (African rice)
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Gene cluster
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
127777035
NCBI-ProteinID:
XP_052159505
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Position
6:24456047..24460736
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AA seq
1039 aa
AA seq
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MDPEERVAEAMKGLLVEYSQQSARLAVQVRGNEYRRAAAAGGGGGFLLSPGERERLRAGS
GLELVIVPVMEGDQVVSSSASAEVLVSPLVEGEVRVVPAVERRRWRRQAAAEEWEEIDPE
TKYRGVRVRFGTRYVAEIHNPTGAGRLWLGTFDTAEQGAWAYDAAARVLRGEAAATNFGD
PAQAPSPLSAEMRSMLAFFDRARARRERVVEERGAAAAEAEASEAPAPAPLLLLPAPPPS
SDVSPVTVQVAAPPSSSDAAPVPATLLSDASPVIVQVPVPPSSDAAPVPAPTLSDASPVP
VQVPVPPPAATAAAAAPVPKKRKLLTASTLSGSGGPRRGRRRVAEATFAGRGRGVWSGRR
RGRGRIPTEVTVGTPSPSAPTPAPASATAPLIQSNVVISPVPPTLAASGIAAWPPVPAIP
ELTTVAAAPLPEKPVLTAHDVVMATLFPNGVFSYTAGSSHAPPPPPPPPPVASGSFFQEV
IPPGGVPTNYAIHEAPDFDPNVFFADVPDGEQDEPVLLSSTSTLLDVDNSLTLVADDAAS
SAQAAVDVASSSAQAAIDVPSSSVLAVVDVPSSSAQAAIDVPASSAQAATDVASLSTQCA
AGNERPIVIITFTVTGTKCCDFPGIINTHHLYRSCTTTVAGGNRGRGRGCGLTRAVVTAG
APPPPSAALVPVPASAPTMEPNATILPGSSTLSPGASAAAPAVAPLTAAPEAILVPMPPP
AAAAAAAAPVPKXRKLQTASTLSGSGGPERGRGRVAEATFASRGRGVXNGRGSGRGRIPT
AVTVGTPSPSAPTPAADPASVPASASAPATTPLMQPNVVISPVPSTLAASGAAAPPPVPA
TPELATAAATRLPEKRILTAHEVVIATLFPNGIFSYTAGPSHAPPPPPPASDSFFQVVIP
PGGVPTNYAVHEALDFDPNIFFADVPDGEQGEPVLLSSMSTLLDVDTSSSVAADDASSSA
QAAVDVASLSAQAAVDVCSSSVQAVINVPSSSAQAAIDVPSSSAQAATDVASSLTQGAAG
NERPIVFDFDLNEPSSNYE
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggatccggaggagagagtagcggaggcgatgaaaggcttgctggtggagtactcccag
cagtcggcgcgcctcgccgtgcaggtacgggggaacgagtaccgccgcgccgccgccgcg
ggcggcggcggcgggtttctgctgtcgcccggggagagggagaggttgagggccggttcc
gggttggagctcgtgattgtgcccgtcatggagggggatcaggtggtgtcgtcgtcggcg
tcggcggaggttttggtttcgccgttggtggagggcgaggttcgcgtcgtccccgccgtg
gagcggcggcgctggcgtcgtcaggcagcggcggaggagtgggaggagattgacccggag
acgaagtatcgtggggtgagggtgaggtttgggacgaggtatgtcgccgagatccacaac
ccgacgggggccgggcggctgtggctggggacgttcgacacggcggagcagggggcgtgg
gcgtacgacgcggcggcgcgggtgctgcgcggggaggcggcggcgaccaacttcggcgat
cccgcgcaggcgccgtcgccgctttcggcggagatgcggtccatgctagcgttcttcgac
cgagctcgagctcgccgcgagcgtgtggtggaggaacgtggggcggcggcggcagaggcg
gaggcgagcgaggctcctgctcctgctcctctcctgttgctgcctgcgccgccgccttcg
tctgatgtgtctccggtgacggtgcaggtggcagcgcctccgtcgtcatctgatgcagct
cctgtgccagcgacgctgttatctgatgcatctccggtgattgtgcaggtgcccgtgccg
ccgtcatctgatgcagctccggtgccagcgccgacgttatctgatgcatctccggtgccg
gtgcaggtgcccgtgccgccgcctgcagccacagccgcagctgctgcacctgtacccaag
aagaggaagctcctgacagcctcaaccctctccggaagcggtggaccgagacgaggacgt
aggcgtgttgccgaggcaacctttgccggtcgcggccgtggagtttggagtgggcgcagg
cgcggacgcggacgcattccgactgaggtgaccgtgggtactccatcgccgtcggcgccc
acacctgcaccagcatcagcaactgcaccgttaatacagtcaaatgttgtgatttcaccg
gtgccgcccacacttgctgcctctggcatagctgcatggccaccggtgccggcgatacct
gagctcacaaccgtagcagcggcgcctttaccggaaaagccggtgctgacagcccatgac
gttgtcatggcaacactcttccccaacggtgtcttctcctacaccgccgggtcatcacat
gcgccgccaccgccaccaccgccaccgccggtggctagcggttccttcttccaggaggtg
atccctcccggcggtgtgccgacaaactacgccatacatgaggctccggactttgaccca
aacgtcttcttcgccgatgtgcccgacggtgagcaggacgagcccgtgttgctgagctcg
acatcgacgctccttgacgttgacaactcattgactctggttgccgacgatgcagcctcg
tcggctcaagcagccgttgacgtcgcatcatcgtcagctcaggctgccatcgacgtccct
tcctcatcggttctggctgtcgtcgacgtcccctcctcatcggctcaggctgccattgac
gttcccgcctcgtcggctcaggctgccaccgatgttgcatccttgtcgacccaatgtgct
gctgggaatgagaggccaatagttatcatcaccttcacagtcactggaaccaaatgctgt
gatttccctggtatcatcaacactcaccacctctaccgtagctgcacgaccaccgttgcg
ggtggaaaccgtgggcgtgggcgcggatgcggacttactcgggcggtggtgaccgcgggt
gctccaccgccaccttctgcagctctagtgccggtgcctgcatcagcaccaacaatggag
ccgaatgccactattttgccggggtcatccacactctcgccaggcgcctctgctgctgca
ccggcggttgcaccgctgacggcggcacctgaagcgatcctggtcccgatgccgccgcct
gcagctgcagccgcagctgctgcacctgtacctaagtagaggaagctccaaacagcctca
accctctccggaagcggtggaccggaacgcggacgcgggcgtgttgctgaggcaaccttt
gctagtcgtggccgtggagtttagaatgggcgcgggagtggacgcggacgcattccgact
gcggtgaccgtgggtactccatcgccgtcggcacccacacctgctgcagatccggcatcg
gtgcctgcatctgcatcagcaccagcaactacaccgttaatgcagccaaatgttgtgatt
tcgccggtgccttctacactcgctgcctctggcgcagctgcaccgccaccggttccggcg
acgcctgaacttgcaaccgcagcagctacgcgtttaccagaaaagcggattctgacagcc
catgaagttgtcattgcaactctcttccccaacggtatcttctcctacactgcagggcca
tcgcatgcgccgccgccgccgccgccggctagcgattccttcttccaggtggtgatccct
cctggcggtgtgccgacaaactacgccgtccacgaggctctggactttgatccaaacatc
ttcttcgctgatgtgcccgacggtgagcagggcgagcccgtgctgctgagctcgatgtca
acgcttctcgacgttgacacctcgtcgtctgtagctgctgatgatgcatcctcatcggct
caggcagccgttgacgtcgcatcgttgtcagctcaagccgctgtcgacgtctgttcctcg
tcggttcaggctgtcatcaacgtcccctcctcatcggctcaggctgccatcgacgttccc
tcctcgtcggctcaggctgccaccgatgtcgcatcctcgttgacccaaggtgctgctggg
aatgagaggccgatagtgtttgactttgacctcaacgaaccatcatccaattacgaatga
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