Oryza glaberrima (African rice): 127777107
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Entry
127777107 CDS
T08853
Name
(RefSeq) two-component response regulator ORR22
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127777107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127777107
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
127777107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
127777107
NCBI-ProteinID:
XP_052159575
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All DBs
Position
6:4046984..4052345
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AA seq
696 aa
AA seq
DB search
MLLGALRMEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAIT
ALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHG
ACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSS
DQNGRSSRKRKELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGID
KAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRDPSFLHMG
AFEGLQSYQPFAPSAALPSFNPHGLLTRTSAAAAFGLQELAAPSSTIQTATGNVTIGHCL
EENQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFSGSSLTNTLSSTLQRVPSSSLPP
QELLECKQAKVSMPPSIRIPPSSSALLERTLGVSTNLGDSSISQQGALPIDGGFSADRLP
LHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSGSTII
LPLDTARRSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNTQNQR
LDSGSFNHNIGAHLADQTNASASILPQMKFDTRISEEKMKQKNTYDLGSSKLQGGFNSSG
CNFDGLLNSIIKVEKDDLPFMDNELGCDLFPLGACI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgggtgctttgaggatggaggagaggaagggattgatggggagggagagggat
caattccccgtcggcatgcgggtcctcgccgtcgacgatgacccggtgtgcctcaaggtt
cttgagaccctcctccggcgctgccaataccatgtaacatcaaccaaccaggctattact
gcgttgaagctgctcagggagaacagggacatgtttgatcttgtcatcagtgatgtccac
atgcccgacatggacggatttaagctccttgagcttgtggggcttgaaatggatctccca
gtcatcatgttatcagtaaatggagagacaaagactgtgatgaaggggataactcatggt
gcctgtgactatcttctaaaaccggtccgaatcgaagaactaaggaacatatggcagcat
gttgttaggaggaagttcggtaatcgtgagcgaaacaatcttgatttctccaaagaatgc
aataagccgcaaagcgcggatactgatcatggaccataccaacctacctgtggttcttct
gatcaaaatgggaggtccagcaggaaaaggaaagaactacacggcgaggacgacgacgaa
ggcgatgataatgattatcaagaaaatgatgagccctcagctgcaaagaagcccagagtt
gtatggtcagttgagctgcaccgaaaatttgttgccgctgtcaaccagcttggaattgac
aaagctgtaccaaaaagaattcttgagcttatgaatgtggagaaactcaccagggaaaat
gttgcaagtcatctacagaagtacaggctttacctcaagagactaagtgctgtagcatca
caacaagccagcattgttgctgcctttggaggcagagatccctccttcttgcatatggga
gcatttgaaggactccagagctatcaaccttttgcaccttctgctgctcttccatctttc
aatccacatggcctgctaacccgaactagcgccgccgcggctttcggacttcaggagctt
gctgccccctccagcacaattcagactgctacaggaaatgtcacaattggccattgcttg
gaagaaaaccagcaggcaaatctagcacaaggcttgactgcggcaatcgggcaacctcag
cttcaacagaactggattcatcaagagggtaatggtctgtctgatgttttttctgggagt
tctctgaccaacactttgtccagcacactccaaagagttccaagcagttcattgccacca
caagaactcttggagtgcaaacaagccaaagttagcatgccgccatcgatacggataccg
ccttcaagttcagcacttcttgagaggactcttggggtttccaccaatttgggagattct
agtatatcccagcagggtgctcttccaatagatggtggattttctgctgacaggttacca
ttgcacagttcatttgatggcgctgttgcaacaaagctagatactagtttggcagcttca
cagagagagattggccagcaggggaaattttcagttagcatgcttgtctccccttctgac
aatcttgcattagccaaaaatgccaaaactggagctagttcttctggcagtactataatt
ctccctcttgatactgcaagacgttcagactacttgcagttcggaggtgcaagcaattct
ttgcagaaaatggatggacagaaacaagatcatatacagagctcaaacattatatggagt
tcaatgccaagcactcaactgccaagtgatacccaaattcataatactcaaaaccaaaga
ttggacagcggaagttttaaccataatattggtgcccatttggctgaccaaacaaatgca
agtgcgtcaatacttccgcaaatgaagtttgacacaagaatatcagaagagaaaatgaag
cagaagaatacatatgacttgggtagttcaaagctgcagggtggatttaattctagtggc
tgcaattttgatggccttctcaattccataatcaaagtggagaaggatgatctcccattc
atggacaatgaattgggctgtgacctttttccacttggtgcctgcatatga
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