Oryza glaberrima (African rice): 127777142
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Entry
127777142 CDS
T08853
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127777142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127777142
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127777142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
Rad17
AAA_22
AAA_33
TIP49
AAA_16
AAA_2
AAA_17
AAA_28
RNA_helicase
NPHP3_N
nSTAND3
IstB_IS21
ABC_tran
AAA_18
Mg_chelatase
Bac_DnaA
NACHT
Viral_helicase1
Cytidylate_kin2
NB-ARC
TsaE
AAA_3
NTPase_1
ATPase_2
Nucleolin_bd
SKI
AAA_11
Parvo_NS1
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
127777142
NCBI-ProteinID:
XP_052159640
UniProt:
I1PYU8
LinkDB
All DBs
Position
6:632862..637613
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AA seq
770 aa
AA seq
DB search
MGKRARHGGSGRSHSPYFESQLRRLITDGGLSSSSAEDVAIALRSRFPEFRRHKLDPFTS
AVRRALNSIPSDSHSDSADDSHASTPSQRRRRRPRHDAHATASSSTSLSDDAAHPPPPPI
YDVTKSMLRTQYASQTPKRDTGSNQQLEIEIAAEKPRRFITSDGGAGGEAKPESAPPSEG
GDRGGKGPTFSDLGGMESVIEQLMMEVVVPLCHPEVPRWLGVKPVAGLLLHGPPGCGKTT
LAHAIANETGVPFYKISAPEVVSGVSGASEENIRSLFKKAYRTAPSIVFIDEIDAIASKR
ENLQREMERRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQA
LRRPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIARATSSFVGADLKALVD
KAGNLAMKRIIDRRRAQFCQEHDENSKHDWWRQPWDANEIEGLSITMDDFEEATKMVQPS
LRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKHPEEYKTFGLNMQAGFLLFGPPGC
GKTLIAKAVAHEAGANFIHIKGPELLNKYVGESESEVRKIFIRAQTNTPCILFFDEVDAL
TTKRGKEGGWVVERLLNQLLIELDGAGERKGVFVIGATNRIDVIDDAALRPGRFGKKHYV
PLPGADERVSILRALARNKPISSSVDLGALARREECNNLTGADLASMVNEAAMAALEERL
EFLENGESSMSSSSAIELPHFERALAKMQPSVSEQQRRHYEALCKKYSAS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgcgcgcgccacggcggctccggcaggtcccactccccctacttcgagtcc
cagctccgccgcctcatcaccgacggcggactctcctcctcctccgccgaggacgtcgcc
atcgccctccgctcccgcttccccgagttccgccgccacaagctcgaccccttcacctcc
gccgtccgccgcgccctcaactccatcccctccgactcccactccgactccgccgacgac
tcccacgcctccactccctcccaacgccgccgccgccgcccccgccacgacgcccatgcc
accgcctcatcctccacctccctctccgacgacgccgcgcacccaccgcctccccccatc
tacgacgtcaccaagtccatgctccgcacccagtacgcctcccagactcccaagcgagac
accggcagcaaccagcagctggaaatcgagatcgccgccgagaagccccgccgattcatc
acctccgatggcggcgccggcggcgaggccaagccggagtccgctccacctagcgaagga
ggcgatagagggggcaaggggcccacgttttcggatcttggggggatggagtcggtgata
gagcagctaatgatggaggtggtggtgcccctatgccatccggaggtgccgcgctggctt
ggggttaagcctgtggctgggctgctgctgcacgggccaccgggctgcggcaagaccacg
ctcgctcatgccatcgccaatgagaccggcgtgccattctacaagatatcggcgccggag
gttgtgtccggggtctctggggcttctgaggaaaacatcagaagcctgtttaagaaggcg
tacaggactgctccatcaattgtatttatagatgagatagatgcgattgcatccaagagg
gagaatctgcaacgggaaatggaacgacggatagttacacagttaatgacatgcatggat
gaataccaccaacaaattggctctggtagcggtgatgtgggttcagagtcagctgaaaag
aaacctggctatgttattgtcattggagctacaaatagacctgacgctgttgaccaagca
cttcgtaggccaggaaggtttgatcgagagatctctcttggtgttccagatgagtatgca
cggaaaaagatacttatgatgcttacccggaatcttcgactggaaggtcagttggacttg
ttgaagatagcaagggccacatcaagctttgttggtgcggacttgaaggcattggtggat
aaagcggggaatctagcaatgaagagaataattgatagaagaagagctcagttttgtcag
gagcatgatgaaaacagcaagcacgactggtggagacaaccttgggatgcaaatgagata
gagggcctgagtattacaatggatgattttgaggaagcaaccaagatggttcaaccatct
ttgagaagagaaggattttcttctatccctgatgtcacatgggatgacgttggaggcctt
gattcgctaaggaaagagtttgaccgctacattatccgatgtatcaagcaccctgaagaa
tataagacatttggattgaatatgcaagctggctttttgctgtttggaccacccggttgt
gggaaaacactgatagcaaaagcagttgcgcatgaggcaggggcaaattttattcatatt
aaggggccagagctgttgaacaagtatgttggtgagagtgaatcagaagttaggaaaatt
ttcatccgtgcacaaactaatacaccatgcatcctgttttttgacgaggtagatgctttg
acaacaaaaagagggaaagaggggggatgggttgttgaacgtctcctgaaccagttgctt
attgaacttgatggtgctggtgaacggaaaggtgtttttgttattggagctacaaacaga
attgatgtgatagatgatgcagcacttcgacctggtagatttggcaagaaacattatgta
cctttacctggtgctgatgagcgggtttcgatattgagagccctcgctcggaacaaaccg
atctcctccagtgttgatttgggtgcactggcacgtagagaggaatgcaacaatctcact
ggtgctgacctagcatcaatggtgaatgaagcagccatggcagcattggaagagaggctg
gagttcctggagaatggggaatcgtcaatgagctcatcatctgcgattgagctccctcat
tttgaacgtgctctagcaaaaatgcagccatcagtatctgaacagcaaaggagacactac
gaggcgttgtgcaagaaatactccgcaagctga
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