KEGG   Oryza glaberrima (African rice): 127777525
Entry
127777525         CDS       T08853                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127777525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127777525
   03041 Spliceosome [BR:ogl03041]
    127777525
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127777525
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127777525
Spliceosome [BR:ogl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127777525
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_Nup35 Calcipressin eIF-3c_N
Other DBs
NCBI-GeneID: 127777525
NCBI-ProteinID: XP_052160092
LinkDB
Position
6:21069023..21073273
AA seq 406 aa
MAGYGEENQNGMNGYEEEEEEEEVEEVEEEVEEEEEEEEEEGADATAAAADAAEEVAEER
RGGGGEVEGVGNGEEAGRTAGGGEGGDSSGKIFVGGVAWETTEESFTKHFEKYGAISDSV
IMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKTRK
IFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEG
RMHDLAGKQVEIKKAEPKKPGGGDSSSNGRHSHGSGGGHRSSYRGSGGGNSGSSSSGGYG
GYGGGYRSAAAAYYGSTGYAGYGRGYGYGGNPAFGSGFGSGYGGSMYGGPYGAYGAYGGA
YGGGGAYGAPGGYGAGGYGAYGGAGGMGGGGSTSGRGSSRYHPYGK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcggggtacggggaggagaaccagaacggcatgaacgggtacgaggaggaggaggag
gaagaggaggtggaggaggtcgaggaagaggtggaggaggaggaggaggaagaggaggag
gagggggctgatgccaccgccgcggctgccgatgcggcggaggaggttgcagaggagagg
cgaggcggaggtggagaagtggagggcgtcggcaatggcgaggaagcggggaggactgcg
ggtggtggagagggcggtgattcgtcggggaaaatttttgttggaggtgtagcctgggag
acaactgaagaatcgttcaccaagcattttgagaaatatggagctatatctgattctgtg
atcatgaaagacaagcatacaaagatgcctcgtggatttggttttgttacattttcggat
ccatctgttattgacaaggttctgcaagatgaacacactatagatggaagaacagttgaa
gttaaaaggactgtcccgagggaggaaatgtcgtcgaaagatggtcctaaaacgagaaaa
atctttgttggtggtattccaccatctcttactgaagataaattgaaggagcatttctct
tcatatgggaaggtagttgagcatcagataatgcttgaccatggcactgggcggtcacga
ggctttggctttgtcacatttgaaaatgaggacgctgttgaaagggttatgtcagaaggg
agaatgcatgatcttgcagggaaacaggttgaaataaagaaggctgagcctaagaaacct
ggcgggggtgattctagctctaatgggagacatagtcacgggagtggtggtggccaccgt
agttcttaccgtggtagtggtggtggcaattctggaagcagcagcagcggtggctatggt
ggatatggtggtggctatcggtcagctgctgcagcttattacggtagcacaggttatgct
ggctatggcagaggttatggatatggaggtaaccccgcatttgggtcaggctttggctct
ggctatggtggttcaatgtatggaggtccatatggtgcctatggtgcatatggtggtgcc
tatggaggtggtggtgcatatggtgcaccgggtggctacggtgcaggaggatatggtgct
tatggcggagctggaggtatgggcggtggtgggagcacaagtggtagaggctcgagcaga
taccacccgtacggaaaatga

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