Oryza glaberrima (African rice): 127777618
Help
Entry
127777618 CDS
T08853
Name
(RefSeq) transcription factor HY5-like isoform X1
KO
K16241
transcription factor HY5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127777618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127777618
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
127777618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Phlebovirus_NSM
CASP_C
Myosin_tail_1
GIT_CC
APG6_N
Saf4_Yju2
GAS
ATF7IP_BD
UPF0242
DUF1192
CENPH
TSC22
FlaC_arch
SHE3
Med9
Macoilin
TMCO5
CENP-F_leu_zip
FmiP_Thoc5
Sas6_CC
Sipho_Gp157
ZapB
SR-25
Motif
Other DBs
NCBI-GeneID:
127777618
NCBI-ProteinID:
XP_052160174
LinkDB
All DBs
Position
6:22661820..22665395
Genome browser
AA seq
183 aa
AA seq
DB search
MQRDHRRSSPPAAASSSERSSDSAPNTDDGKEGVDSDDEEIVGRVPEFGLALPGTSTSGR
GSVRVAGDAAATAAGTSSSSPAAQAGVAGSSSSGRRRGRSPADKEHRRLKRLLRNRVSAQ
QARERKKAYMSELEARVKDLERSNSELEERLSTLQNENQMLRQVLKNTTANRRGPDSSAG
GDS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagatcaccggaggagctcgccgccggcggccgcctccagcagcgagaggtcg
tcggactccgccccaaacaccgacgacggcaaggaaggggtggatagcgacgacgaggag
atagtagggagggtgccggagttcgggctggcgctgccggggacgtcgacgtcgggcaga
ggtagtgttcgggttgcaggtgacgcggcggcgacggcggccgggacgtcgtcgtcgtcg
cccgcggcgcaggccggcgtcgccggcagcagcagcagcgggcgccgccgcggacgcagc
cccgccgacaaggagcaccggcgcctcaaaagattgctgaggaaccgggtgtcagcgcag
caggctcgggagaggaagaaggcgtacatgagtgagctggaggcgagggtgaaggacctg
gagaggagcaactcagagctggaggagaggctctctaccctgcaaaacgagaaccagatg
cttaggcaggtgctgaagaacacaacagcaaacagaagagggccagacagcagtgccggc
ggagacagctag
DBGET
integrated database retrieval system
