Oryza glaberrima (African rice): 127777651
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Entry
127777651 CDS
T08853
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127777651
03036 Chromosome and associated proteins [BR:
ogl03036
]
127777651
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127777651
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127777651
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
127777651
microRNA pathway
RISC loading complex
127777651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
127777651
NCBI-ProteinID:
XP_052160220
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All DBs
Position
6:22502614..22515905
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AA seq
978 aa
AA seq
DB search
MLEVLDMAPPRHQPAAGKAGGGRGHGHGHGHGHGGGGGGPAARKQPLQSSMAQPKAETAA
AVAPPEGGKKCGGGGGRRRGGRGRGGRAGAGPGPGLAAAPAVVVAPAARAVIGPPVASKG
LSFCRRPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRSVNRAILSELVRLY
RDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYRVAIKFAAR
ADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKPQRLGDGLQ
SWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSDANRIKIKK
ALRGVKVEVTHRGNVRRKYRISGLTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHP
HLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCRRPREQEMDILQTV
QQNGYEQDPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKV
INGCKVNHWACINFSRSVQETTARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVEKA
LKHVYNMSLNKLKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKISK
QYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAV
VASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQK
PLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNH
KDRSSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADE
MQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTTSKSSTGTNGTS
VKPLPAVKEKVKRVMFYC
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggacatggcgccgccccggcaccagccggcagctgggaaggcgggc
ggcgggcgcgggcatgggcatgggcatgggcatgggcatggtggtggtggtggtgggccg
gcggcgaggaagcagccgttgcagagtagcatggcgcagcccaaggcggagacggcggcg
gcggtcgcgccgccggagggagggaagaagtgcggcggcggtggcgggaggcggcgcggc
gggcgcgggcgcggcggcagggcgggtgcggggccggggccggggctggcggcggcgccg
gccgtggtggtggcgcccgcggcgcgcgccgtcattgggccgccggtggcgagcaagggg
ctgtcgttctgccggcggccggggttcgggacggtgggcgcccggtgcgtcgtgaaggcg
aaccacttcctcgccgagctccccgacaaggatctcacccagtacgacgtgaagatcacg
ccggaggtgagctcccggagcgtgaaccgggcaatcctgtcggagctggtccgcctctac
cgcgactccgatctcggaggtcgcctcccggcctacgacggccgcaagaacctctacacc
gccgggacgctcccgttcgacgcgcgcgagttcgtcgtccgccttaccgacgacgacgac
ggcaccggcgtcccgccacgggagagggagtacagggtggccatcaagttcgccgcgcgc
gccgacctccaccacctccggcagttcatcgccgggcgccaggccgacgcgccgcaggag
gctctccaggtgctcgacatcgtgctccgtgagcttgccaaccgcaggtatgtctcgata
gggcggtcgttctactcgccggacataaggaagccgcagcggctcggcgatggcctacag
tcatggtgtgggttctaccagagcatccggccgactcagatggggttgtcgcttaacatt
gatatgtcatctaccgcgttcatcgagccgctaccagtgatcgaattcgtggcccaaata
cttgggaaggatgtcatatcgaggccattgtcggatgcaaacagaatcaagatcaagaaa
gccttgcggggcgtgaaagttgaagtcactcaccggggaaatgtgaggcggaagtatcgc
atttcagggctgacaacacaaccaactcatgaactgattttcccaatcgatgaccaaatg
aacatgaaatctgtcgtagagtatttcaaggaaatgtatggcttcaccattcagcatccc
catcttccctgccttcaggtgggaaaccaaaagaaggcaaactatctaccaatggaggcc
tgtaagattgttgagggtcagagatatacaaagaggttgaatgaaaagcagatcacatca
ttactcaaggttacttgccgcaggcctagagaacaggagatggatattctacagacagtt
caacaaaatggatatgagcaagacccttatgcaaaagaatttggaatcaacattagtgag
aagctaacctcagttgaagctcgggtccttcctgcaccttggctgaaatatcatgatact
gggaaggaaaaggagtgcttgccacaagttggtcagtggaacatggtgaacaagaaagtg
ataaatgggtgcaaggtgaatcattgggcttgtataaatttctcaaggagtgtgcaagaa
actactgctcggggattctgccaggagttggcacaaatgtgtcagatatccggcatggaa
ttcaacagtgagcctgtgataccaatatactcagctagaccagatcaagtagagaaggca
cttaagcatgtgtataatatgtcattaaacaagctcaagggaaaagagcttgagcttctt
ttggccatcctccctgacaacaatggttctttatatggtgatataaaacgtatatgtgaa
actgacttggggttgatatcacaatgttgcttaaccaaacatgttttcaagatcagcaag
cagtacctggcaaatgtctcacttaaaatcaatgttaagatgggaggaagaaacaccgtg
ctgctggatgcaataagttggaggattcctttggtcagtgacataccaactattatattt
ggtgcagatgtcacgcatcctgaaaccggggaggactctagcccatccattgctgctgtt
gttgcatctcaagactggccagaagttacaaagtatgctggattggtgtgtgctcaggct
catcggcaagagctcattcaagatctttacaagacatggcatgatcctcaaagaggcacc
gtaacaggaggcatgatcagggagctcttaatatccttcaggaaggccactgggcaaaag
ccattgagaataattttctacagggatggtgtcagtgaaggccaattctaccaagttctc
ctctatgagttggatgctatccgcaaggcatgtgcatctctagaaccaaattatcagcct
cctgtaacattcgtggttgtccaaaagcgtcaccatacaagactcttcgcaaacaatcat
aaagacagaagtagcacggacaaaagtggaaacattttgcctggaactgttgttgattca
aagatctgccacccatcagagtttgatttctacctctgtagccatgctggaattcaggga
acaagtaggccagctcactaccacgtcctttgggatgagaacaatttcactgcagacgaa
atgcagacattgacaaacaacctttgctacacttatgcacggtgcacacgctctgtttct
gttgttccacctgcatactatgcgcatctggctgcgtttcgagcgcggttctacatggag
ccagagatgtcggagaaccagacgacgtcgaagagctccactgggacgaacggaacctcg
gtgaagccattgcctgcggtgaaggagaaggtgaagagggtgatgttctactgttga
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