Oryza glaberrima (African rice): 127777817
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Entry
127777817 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127777817
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127777817
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127777817
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127777817
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127777817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
127777817
NCBI-ProteinID:
XP_052160396
UniProt:
I1Q480
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All DBs
Position
6:complement(25394627..25401627)
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AA seq
1069 aa
AA seq
DB search
MLGGGLGGGGGGGGAGGLGLDLSAVIQAAVVGLVLFSAAVVAVRRAASRYFVVDAAGFAA
SSYDDHHHPHHHLVMTPRGEEQQRQQGGGAAQGAQAAASGGGEPCAACGYIATKKCSGCK
RVRYCSQGCQSKHWQSGHKFKCKQMKKSSPADKLSGGGEEDRNKLSGFGPISLVPARRKL
NKVIFPYDEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRE
CYKRHEDWCFLCELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAI
DKMQSACLDEFGGEKAVDPSMQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVE
IHGDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS
GRFGKLNKRVTFPMKLDLTPYMSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRG
RWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEELMKQQQQLKVCPLNGQN
HLIQEDVPLEGVPSLKPSEDLEVDFESNNKSLHTMDREPDLDFHVSFDRDKFTNNDIMHP
PVSTVSHALDENTRGDSGFPLEESNTMGSMQFGNSTYETSLVHSPAEQCEEPASCIDSVD
YMEIDTEAGVKVERWSRPALGDSVGVMGNGTLVPALENGLAGKPIPGFPDKPSRINSFFA
EGCQTGDNGAGSSQELNGHCNGEPSCPEQGVLTNGGNTPSPSTQCYENKFATSTNGNYSI
GNGDTLSSSNSLHAGKQNAGFTYNGFNPKPYKEPSGSNTYLNNTCNGKPSEDNHNKCAPN
LPAKDCQGGMPFLHRGFLLRPCSRGNPGKCDDGLSISNGTSSSFVSSNSKSSNISSSRNG
EGGTPFLSPSFRTNHCRESAAMDTSASSVHDLTTSYNISLEQKSIGAAVPSDLIKESWGE
DGTTFGTVYQQRATSVDNVSSRHDENGHVILGANNSSYGGENGSNNGILDMNSSSSQRDA
ASSTMMASEKGIGPKTADQVNYISDAPEHDGLRRRLTSNFPDQNGIDAQ
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggaggcctcggcggcggcgggggcggcggcggtgcgggtgggctgggcctc
gacctctcggcggtgatccaggcggcggtggtcggcctcgtgctgttctcggcggccgtc
gtcgccgtgcgccgcgccgcgtcgaggtacttcgtcgtcgacgccgcggggttcgccgcc
tcctcgtacgacgatcaccaccacccccaccaccacctcgtgatgacgcctcgcggggag
gagcagcagcggcagcagggcggcggcgcggcgcagggggcgcaagccgccgccagtggg
ggcggggagccctgtgccgcgtgcggctacatcgccaccaaaaagtgctccgggtgcaag
cgcgtgcggtattgttctcaaggatgtcagtcaaagcattggcaatctggtcacaagttc
aagtgcaaacaaatgaaaaaatcaagccctgctgacaagctatcaggtggaggcgaggaa
gacagaaataagttatctggttttggtcccatctcattagtacctgcccgtagaaaatta
aacaaggtcatctttccatatgatgaatttctaaagctgtgcaactggagggaccttgat
tatttaccttgtggccttttgaattgtggcaacagttgctttgccaatgttgttttacaa
tgtctttcatgtacgaggccacttgcagcctatctcttaggaatggaccatagcagggaa
tgttataagagacatgaagattggtgtttcttgtgcgaactgcaatgccatatccaaagg
gcaagtgaaagtatgcatccatttgcgccgaagaacattctttctcacctgccaaatata
ggtgggaaccttggctttggtagacaagaggatgctcatgaattcatgaggtttgcaata
gataagatgcaatctgcttgtcttgatgaatttggaggcgagaaggctgtagaccctagc
atgcaagaaacgactcttattcaacacatatttggtggtcgtctgcaatcccaggttcaa
tgtactgcatgtggaatggtctcaaatcgctatgagaatatgatggacttaacagttgaa
attcatggtgatgctgactccttggaagaatgcttagataagttcactgcagtagagtgg
cttgatggtgataataagtacaaatgtgatggatgcagcgactatgtcaaagcacagaaa
cgtcttacagtttatcaagctccaaatatcctcacaattactctgaaaagattccagagt
ggtagatttgggaaactaaacaagagagttacattcccaatgaagttagacctaacgcca
tacatgagtagcactgatggaagtgaccaatacgatctctatgctgttgttgttcatctg
gatatgctcaatgcttcattttttgggcattatatatgctatataaaaaattaccgagga
cgctggtataaaattgatgactgcaaggttatggctgttgatgaggaggaagtacatgct
caaggtgcttatatgcttctatatagcaggagaacagctcgccctaggccactaattgca
gtagaagaactcatgaaacagcagcaacagttgaaagtatgccctttgaatggacaaaat
catttgatacaagaggatgtgccattagaaggcgtgccatctttgaaaccctcagaagat
ctggaagttgattttgaatccaacaacaaatctttacatactatggacagagagccagac
ttggattttcatgtgagctttgatagagataagttcactaacaatgatattatgcaccca
ccagtttcaacggtatcgcatgcccttgatgaaaatactagaggagattcaggttttcca
ttggaagaatcgaacaccatgggatctatgcaatttggcaactccacatatgaaacatct
ttagtgcattcccctgcagagcagtgtgaagaacctgcgtcatgtattgattcagttgac
tacatggaaattgacactgaagctggcgttaaagttgaaagatggagcaggcctgcctta
ggtgattcagttggagtgatggggaatggtacattggtcccggcattggagaatggtttg
gcgggtaaaccaattcctggttttcccgacaaaccctcgagaataaattcattctttgca
gaaggatgtcaaactggtgacaatggtgctggttcctcgcaagagttgaatggtcattgc
aatggagaacccagttgcccagagcaaggagttctgaccaatggtggcaacacgccctct
ccaagcacacaatgctatgaaaataagtttgcaacatccaccaacggcaactattctatt
gggaatggtgatacattatctagcagcaactcattacatgcgggcaaacagaatgctggc
tttacctataatggtttcaatccaaaaccttacaaagaaccatcaggaagcaacacatat
ctgaataatacatgcaatggtaaaccatcggaagataatcacaataaatgtgccccaaac
ctgccggcaaaagattgccaagggggcatgccattcttacatcgtggcttccttctaagg
ccttgttctaggggaaatccaggcaaatgtgatgatggcttgtcaattagtaatggcaca
tcatcatcctttgtgagtagtaacagcaaatcaagtaatatttcatcatctcgaaatggc
gaaggaggcacaccattcttgtctcctagttttcgcacaaatcattgcagagagtcagct
gccatggacacctctgcaagctctgtccatgatttgacaaccagctataacatttccttg
gagcaaaaatctattggtgctgcagtaccgtcagacctgataaaagaaagttggggtgaa
gatggcacgacttttggcactgtttaccaacaaagagcaacttctgttgataatgtaagc
agccgccatgatgaaaatgggcatgtgattttgggtgccaataattccagttatggagga
gaaaacggcagtaataatggaattcttgatatgaatagcagcagtagccaaagggacgca
gcatctagtaccatgatggcttctgagaaaggcataggacctaaaacagctgaccaagtc
aattacatatctgatgcacctgaacatgatggtttgcgacgaagattaacctcaaatttt
cctgatcagaatggtattgatgctcaataa
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