KEGG   Oryza glaberrima (African rice): 127777846
Entry
127777846         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127777846
   04120 Ubiquitin mediated proteolysis
    127777846
  09126 Chromosome
   03083 Polycomb repressive complex
    127777846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127777846
   04121 Ubiquitin system [BR:ogl04121]
    127777846
   03036 Chromosome and associated proteins [BR:ogl03036]
    127777846
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127777846
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127777846
   Cul7 complex
     127777846
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127777846
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127777846
SSDB
Motif
Pfam: Skp1 Skp1_POZ KIP1
Other DBs
NCBI-GeneID: 127777846
NCBI-ProteinID: XP_052160427
LinkDB
Position
6:complement(879589..880510)
AA seq 206 aa
MSSWPLIGNQSPNVGRLRDRSASEFAVDQFRHLSARVTSSMAAAAEEKNKKMIKVISSDG
EAFEMTEAAASMSRILLHMIEDGCTGAGGAGITLPNVAGSALAKVIEYCTKHAIAAAEGS
SSSRKAKEELKKFDVEFMEVGIDMLYDLIMAANFMGVEGLLSLAAQRTAELIKGKSPEQI
REMFGIKNDHTPEEEEQIRKEYEWAF
NT seq 621 nt   +upstreamnt  +downstreamnt
atgagctcatggcccctgatcggcaatcaatcaccaaacgtgggtcgtctcagagatcga
tcagcttcagaattcgccgtcgatcaatttagacatctatcagctcgcgtgacatcatca
atggcggcggcggcagaagagaagaacaagaagatgatcaaggtgatcagctccgacggg
gaggccttcgagatgacggaggcggcggcgagcatgtcgcggatactcctccacatgatc
gaggacggctgcaccggcgccggcggcgccgggatcactctccccaacgtcgccggcagc
gccctcgccaaggtcatcgagtactgcaccaagcacgccatcgccgccgccgaaggtagc
agcagcagccgcaaggcgaaggaggagctgaagaagttcgacgtggagttcatggaggtg
ggcatcgacatgctgtacgacctgatcatggcggccaacttcatgggcgtggagggcctt
ctcagcctggcggcgcagcgcacggcggagctgatcaagggcaagtcgccggagcagatc
agggagatgttcgggatcaagaacgaccacacgccggaggaggaggagcagatccgcaag
gagtatgaatgggccttctag

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