Oryza glaberrima (African rice): 127778112
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Entry
127778112 CDS
T08853
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127778112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127778112
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
127778112
Ubiquitin system [BR:
ogl04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
127778112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
127778112
NCBI-ProteinID:
XP_052160730
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All DBs
Position
1:1195811..1201776
Genome browser
AA seq
1090 aa
AA seq
DB search
MENLPNGSANIAEKNQDNEMSTDAGEPEEVADIFIYREDVVSLKSKEDTRGLVLEVAGEY
DSEGSITDDDTDTEEHEHKNSHRTENGGADGDNVSNGVDVDSQSSLPDNKVRVLWIDGVE
KTEDIDSVVVMDRSFLHGDIVASATDPTGQMGLVADVSLVVDLQGPHGEIIKGVSSKDLR
RIREFNVGDYVVSGPWLGRVDEVLDNVNVLFDDGSVCKVARADPMRLRPALGPLNPNASC
PFYPGQRVKAVNSSVYKTSRWLNGLWKASRLEGTVTKVETVAVIVYWIASAHFATNQESV
PPEEQNPKDLTLLSCFSYANWQLTDWCLPNQYTSSCTDDSLIESSEIKDSDDIPESSDVK
TELTQKTDMDENPGRMDGDSSADGSNMVYEDNTCLAKQSESGTIASTVPKEGSQDNATYR
KKLRKVFVKKDKRTRRRDESFERALLIANTYTKVDVIWQDGTKECGASSTSLIPIHSPND
HEFFPEQYVVDKVGNDVDDSSETKRVGLVRSVNAKDRTASVSWFKPSLHPEEPREIECNE
IVSAYELDGHPDYDYCYGDVVVRLPSVSLPVESTNRENTMELDNVNSTEVSATPVADAEE
QFPQKESSLEFTSLSWAGNIIGFEDGDIIVIWGDGSVSKVGPHEIYVVGREDDGASLDDG
TASDGASWETVDDNQTDLPDDSAQDDSQNVADSNIERENGSFNSQDGSSVATGPLSVAFG
FVTRLASELFARGKKHLDGSNSDAMDEVESHQSNEISESGDDIDKAEGENNVATSESTVV
TTNDASGGKSVDVDMADKPGDSDGFKHFDVQQCPPDHHYLENMAQQGTGGRKWVKKVQQE
WNILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFDFHLPPEFPQVPPSAYY
HSGGLRVNPNLYVDGKVCLSLLNTWTGRGNEVWDPSSSSILQVLVSLQGLVLNEKPYFNE
AGYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKA
CEAYLQGNGVGTLTDDACTTERSKEQPCSVGFKLALAKIMPRLITALKDAGANCDQYEHL
GKTETAQEEH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctaccaaatggctcagcaaatatagctgagaagaaccaggataatgagatg
tctacagatgctggtgagcctgaagaagtagcagatatatttatttatagagaagatgtt
gtcagcttgaagtcaaaagaggacacccgtgggttggttttggaggtagcaggagaatat
gattctgaaggtagcatcactgatgatgatactgatactgaggagcatgaacacaaaaat
tctcataggactgaaaatggtggtgctgatggtgataatgtcagtaatggagttgatgtt
gatagtcagagttcattgcctgataacaaggttagggttctatggattgatggtgtcgag
aagacggaagatattgacagcgtggttgtcatggacagaagtttccttcatggagatata
gtggcttctgccacagatccaactggtcagatgggacttgttgctgatgtcagccttgtg
gttgatttgcaaggacctcacggagaaataataaagggagtatcctctaaagatttgaga
cgcatcagggaatttaacgtaggtgattatgttgtctctgggccatggcttggtcgagtc
gacgaggtgttggataatgttaatgtgttatttgatgacggctccgtctgtaaagtagcc
agggcagatcctatgcggctaaggccagcattggggccactgaatccaaatgcaagctgt
cccttttatcctggacagcgtgtcaaggcagtgaattcatctgtttacaaaacatccagg
tggctcaatggactatggaaagcaagtcgtcttgaaggcactgtcacaaaggtggaaaca
gttgcagttatagtttattggattgcatctgcacactttgccacgaatcaagaatctgtt
cctcctgaagagcagaacccaaaggatctgactcttttatcttgtttttcatatgcaaat
tggcaattaactgattggtgtcttcctaaccaatacacatcatcgtgtactgatgattct
ttgatcgaaagttcagaaataaaagactctgatgacattcctgaatccagtgatgttaag
acagaactaacgcagaagactgatatggatgaaaaccctgggaggatggatggagattct
tctgctgatggatcaaatatggtttatgaagataacacatgcttagccaaacaatcagaa
tcaggcactattgcatcaaccgttccaaaggagggatcacaggacaatgcaacttacagg
aaaaaacttaggaaagtttttgtcaaaaaggataaaagaacaagaagaagagacgagagc
tttgaaagggctctgcttattgcaaatacatacacgaaggttgatgtgatctggcaagat
gggacaaaagaatgtggagcaagctcaacatcgctcatcccgatccacagtccaaatgac
catgaattctttccggagcagtatgtcgtggacaaggttggtaatgatgttgatgattct
tctgaaacaaaacgtgtgggtcttgttagaagtgttaatgcaaaggaccgaactgcatct
gtatcatggtttaagccttcattacacccagaggagcccagagaaatcgagtgcaatgaa
attgtaagtgcatatgaattggatggccatccagattatgattattgctatggagatgtt
gttgttcgcttgccatctgtttcactgcctgttgaatcaaccaatagggagaacaccatg
gaactggataatgtaaattctacagaagtatcggcaacccctgtagctgatgcagaggaa
cagtttccacagaaggaatccagtttggaatttactagcctttcatgggctggtaatata
attggttttgaagacggtgatattatagtcatttggggcgatggttcagtgtcaaaggtt
ggtccacatgaaatatatgttgttggtcgtgaagatgatggtgcctcactagatgatgga
actgccagtgatggtgctagctgggagactgttgatgacaatcaaacggatttgcctgat
gattctgcacaggatgattcgcaaaatgtagcagatagtaacattgaaagggaaaacggt
tcatttaattcgcaggatggaagctctgttgcaactggtccactttctgttgcttttggc
tttgtgacccggctcgcgagtgaactctttgctcgaggtaaaaagcatttagatggatca
aactcagatgctatggatgaagttgaatctcaccagtctaatgagatttcagaatctggt
gatgatattgataaagctgagggggagaacaatgtggcaacatctgagagtaccgttgta
acaacaaatgacgcttccggtgggaagtctgtagatgttgatatggctgacaagcctgga
gattcagatggcttcaaacactttgatgttcagcagtgccctccagaccatcattacctg
gaaaacatggcgcagcagggcactggtggaagaaagtgggtaaaaaaggtacagcaggaa
tggaacatacttgagaaaaatctaccagattatatttatgttagggtatttgaggatcga
atggacctcataagagccgtgattattggagcaagtggaacaccataccaagatggtctt
ttcttcttcgacttccaccttccacctgagtttccacaagttcctccgtcggcgtactat
cattctggaggtttgcgcgtaaatccaaacctgtatgtggatgggaaggtctgcttaagt
ctcttgaatacctggacgggcagagggaatgaagtatgggatccatcatcatccagtatt
ctccaagtcctggtttcacttcagggcttggttctaaatgaaaagccttattttaatgaa
gctggctatgagaagcaagttggtactgttgaaggggagaagaatgcattgccatataat
gagaacacatatctgctgagcttgaaatccatgttgtatatcctgaggcgacctccaatg
catttcgaggactttgcaaagagccacttctccaagcgtggcaaatacattctcaaagct
tgtgaggcctatttgcaaggtaatggggttgggacgctcacagatgatgcctgcaccacc
gagagaagcaaagaacagccatgctcggtgggtttcaaactcgcattagcaaaaattatg
ccacggttgattactgccctgaaggacgctggagcaaattgtgaccaatatgagcacctt
gggaaaacggaaactgctcaagaagaacactga
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