Oryza glaberrima (African rice): 127778304
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Entry
127778304 CDS
T08853
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127778304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127778304
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127778304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WDR55
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Utp13
Beta-prop_IFT122_1st
Rpr2
Motif
Other DBs
NCBI-GeneID:
127778304
NCBI-ProteinID:
XP_052160845
UniProt:
I1Q950
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All DBs
Position
7:6830391..6832301
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AA seq
533 aa
AA seq
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MAADTSKPFFPAAPNPALLPSGRKPSRLSPEASYWRSFRASELTPANEFNVTHLAFSPSS
APTLAASWSTSVLLFSGDPLSPLPRIPASQDVAFSPSFRSDGSLLAVGDKKGVVRVFRAD
KKQSSGALRTLTAHTAETRVVRYPVAGGDKVHLFTAGDDALLAYWDVPSETPVFAAPAAH
RDYIRAGAASPADHNIFATGSYDRIVKLWDARMGKTSTLSFSHGELVESVLFLPFGGLLA
TAGGNVVRIWDVIGGGRLLHSVESHVKTVMALALAKMTNTGETRLLSAGSDGYVKSFDYG
KLKLTHSMRYPKELLSLACSPCGTVLVAGSSKGTIYMGRRKKKSTGEDEEEGKGVGGELD
WAPTKPEKRRLAPSNYRYFLRGQNAKAKEGDLVIEKPKKVKVAEHDKLLRKFRHKDALVS
ALARNNPRSIVAVMEELVSRRKLVRCIENLDTEELVLLLLFLHRNATLPRYARFLMGVAN
KVLEMRADDIRSDENLRGCVRNLKRMAAEEIQIQHTLQGIQGMISPMLALASR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacacctccaagcccttcttcccggcggcgccgaaccccgccctcctcccc
tccggccgcaagccctcccgcctctccccggaggcctcctactggcgctccttccgcgcc
tccgagctcacccccgccaacgagttcaacgtcacccacctcgccttctccccctcgtcg
gcccccaccctcgccgcctcgtggtccacctccgtgctcctcttctccggcgacccgctc
tccccgctcccccgcatccccgcctcccaggacgtcgccttctccccgtccttccgctcc
gacggctccctcctcgccgtcggcgacaagaagggcgtcgtccgcgtcttccgcgccgac
aagaagcagtcgtcgggcgcgctccgcacgctcacggcccacaccgccgagacccgcgtc
gtccgctaccccgtcgccggcggcgacaaggtccacctcttcaccgccggcgacgacgcg
ctcctcgcctactgggacgtgccatccgagacgcccgtgttcgccgcccccgccgcccac
cgcgactacatccgcgccggcgccgcgtcccccgccgaccacaacatcttcgccacgggc
tcgtacgaccgcatcgtcaaattgtgggacgcccgcatggggaagacgtcgacgctgtcc
ttctcccatggcgaattggtggagagcgtgctgttcctgccgttcggcgggctgctggcg
acagccggcgggaacgtcgtcaggatttgggatgtcattggtggcgggcggcttctccac
tcggtggagagccatgtcaagacggtgatggccctcgcgctcgccaagatgaccaacacc
ggcgagacgcggctgcttagcgcggggagtgatggttatgtcaagagctttgattatggc
aagcttaagctcacgcactcgatgcgatatcctaaggaattgctttccttggcgtgctcg
ccgtgtgggacagtgctggttgctggatcttcaaagggcacaatttatatgggtaggagg
aaaaagaagtcgacaggggaggacgaggaagagggtaagggtgttggtggtgagcttgat
tgggcaccaaccaagccggagaagcggcggttggcaccgtccaactataggtacttcctc
cgtggacaaaatgcgaaggctaaggaaggtgaccttgtgattgagaagcctaagaaggtg
aaggttgctgaacacgataagttgctgaggaagttcaggcacaaggatgctctagtttca
gcgttagctcgaaacaatccaaggagcatagtggcggtgatggaggagctagtttcaagg
agaaagctggtcagatgcatcgagaacttggacacggaagaactcgttcttctcctgctg
ttcctgcaccgaaatgcaaccttgccaaggtatgccaggttcttgatgggggtggcaaac
aaggtgctggagatgcgcgcggatgatatccgatcagatgagaacctaaggggttgtgtt
agaaatcttaagaggatggctgcagaggagattcagatacagcacacattgcaggggatc
caagggatgatttcacccatgcttgcacttgccagtagatga
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