KEGG   Oryza glaberrima (African rice): 127778304
Entry
127778304         CDS       T08853                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    127778304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ogl03009]
    127778304
Ribosome biogenesis [BR:ogl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    127778304
SSDB
Motif
Pfam: UTP15_C WDR55 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Utp13 Beta-prop_IFT122_1st Rpr2
Other DBs
NCBI-GeneID: 127778304
NCBI-ProteinID: XP_052160845
UniProt: I1Q950
LinkDB
Position
7:6830391..6832301
AA seq 533 aa
MAADTSKPFFPAAPNPALLPSGRKPSRLSPEASYWRSFRASELTPANEFNVTHLAFSPSS
APTLAASWSTSVLLFSGDPLSPLPRIPASQDVAFSPSFRSDGSLLAVGDKKGVVRVFRAD
KKQSSGALRTLTAHTAETRVVRYPVAGGDKVHLFTAGDDALLAYWDVPSETPVFAAPAAH
RDYIRAGAASPADHNIFATGSYDRIVKLWDARMGKTSTLSFSHGELVESVLFLPFGGLLA
TAGGNVVRIWDVIGGGRLLHSVESHVKTVMALALAKMTNTGETRLLSAGSDGYVKSFDYG
KLKLTHSMRYPKELLSLACSPCGTVLVAGSSKGTIYMGRRKKKSTGEDEEEGKGVGGELD
WAPTKPEKRRLAPSNYRYFLRGQNAKAKEGDLVIEKPKKVKVAEHDKLLRKFRHKDALVS
ALARNNPRSIVAVMEELVSRRKLVRCIENLDTEELVLLLLFLHRNATLPRYARFLMGVAN
KVLEMRADDIRSDENLRGCVRNLKRMAAEEIQIQHTLQGIQGMISPMLALASR
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggccgccgacacctccaagcccttcttcccggcggcgccgaaccccgccctcctcccc
tccggccgcaagccctcccgcctctccccggaggcctcctactggcgctccttccgcgcc
tccgagctcacccccgccaacgagttcaacgtcacccacctcgccttctccccctcgtcg
gcccccaccctcgccgcctcgtggtccacctccgtgctcctcttctccggcgacccgctc
tccccgctcccccgcatccccgcctcccaggacgtcgccttctccccgtccttccgctcc
gacggctccctcctcgccgtcggcgacaagaagggcgtcgtccgcgtcttccgcgccgac
aagaagcagtcgtcgggcgcgctccgcacgctcacggcccacaccgccgagacccgcgtc
gtccgctaccccgtcgccggcggcgacaaggtccacctcttcaccgccggcgacgacgcg
ctcctcgcctactgggacgtgccatccgagacgcccgtgttcgccgcccccgccgcccac
cgcgactacatccgcgccggcgccgcgtcccccgccgaccacaacatcttcgccacgggc
tcgtacgaccgcatcgtcaaattgtgggacgcccgcatggggaagacgtcgacgctgtcc
ttctcccatggcgaattggtggagagcgtgctgttcctgccgttcggcgggctgctggcg
acagccggcgggaacgtcgtcaggatttgggatgtcattggtggcgggcggcttctccac
tcggtggagagccatgtcaagacggtgatggccctcgcgctcgccaagatgaccaacacc
ggcgagacgcggctgcttagcgcggggagtgatggttatgtcaagagctttgattatggc
aagcttaagctcacgcactcgatgcgatatcctaaggaattgctttccttggcgtgctcg
ccgtgtgggacagtgctggttgctggatcttcaaagggcacaatttatatgggtaggagg
aaaaagaagtcgacaggggaggacgaggaagagggtaagggtgttggtggtgagcttgat
tgggcaccaaccaagccggagaagcggcggttggcaccgtccaactataggtacttcctc
cgtggacaaaatgcgaaggctaaggaaggtgaccttgtgattgagaagcctaagaaggtg
aaggttgctgaacacgataagttgctgaggaagttcaggcacaaggatgctctagtttca
gcgttagctcgaaacaatccaaggagcatagtggcggtgatggaggagctagtttcaagg
agaaagctggtcagatgcatcgagaacttggacacggaagaactcgttcttctcctgctg
ttcctgcaccgaaatgcaaccttgccaaggtatgccaggttcttgatgggggtggcaaac
aaggtgctggagatgcgcgcggatgatatccgatcagatgagaacctaaggggttgtgtt
agaaatcttaagaggatggctgcagaggagattcagatacagcacacattgcaggggatc
caagggatgatttcacccatgcttgcacttgccagtagatga

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