Oryza glaberrima (African rice): 127778508
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Entry
127778508 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127778508
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127778508
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
127778508
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
Arm
DUF6803
CAMSAP_CH
TALPID3
UME
Motif
Other DBs
NCBI-GeneID:
127778508
NCBI-ProteinID:
XP_052161088
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All DBs
Position
7:17571419..17578884
Genome browser
AA seq
1210 aa
AA seq
DB search
MSRREPAVSSPFRDLSNLRTPNPRAPPNPKSSASKEEPLPSATPTTRRRRGPPPPPRPGA
ATATPLARRLRALELDQSRSARRAESGRDGALRAFASSATSWLSLLLRDPSACGCAPSAA
VARVTRDAPAHGVQGKRDAVDGERARGRSPKRHRGGEDRGGPGPRRKTMTPAMAASLRDS
LREVCSLDDVTERMGSHMSREACEEVLVMMCQICKNIDNGRLKMKEHCPLVSDLRLRDKA
IRIFMCYNPKWLRIGLHIVLGGDSWIQNESQKKDKEVAFLKFVLEKQLFVHMNTQPSALN
KAPEGHRRACYAEAASNSILKRLFLLVAALDRAKIESGLPSESGIDGLDGGSPLLFCRQT
EIKSSRQIVQESLGEVMHGEGDLLMHLNIMGYKLNYQQLALSEYDFTVGNLFEDLQDGII
LCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSDADGLSISAEDIA
NGDKELILALLWNMFIYMQLPVLVNETSVAQEISRLKAPVSEQSISEMKSQTGLLYDWIQ
VVCAKYGISVESSSQIDRRALNYFISYYLNINIPNFPLKETLSDCRKELFSCHKTDMIAD
ITTYQFNNIGKVLAQFLQDLPGWDILANDVLFDGKSAIILLAFLSSHLTNVRRLEQLKNL
IDSKLDHQSLVTEVSPRRRSRGTNDMKCHFPQTEETDGSRSTREWAATVIQTQARRLNAM
SKYCKLKNATQPCNKGHDPASSSPLKSIADSSCIDSATKLVCEDDVDCSSNSCQVLFYHD
PVSTKVDFLFCRKAMAARKIQFAYRRFAHRIRSRISAAIKIQSHWRCFSVRIHFKRQIQN
ITTIQAVARCVLCHRDFQKQRHAAIVIQRIFRGWLARKKLLGSWSPGSGINFCALDQNQH
KISHQSTQLKIVLYSVLRLQRWWRKVLLNRSIRTSAISVQSFVRGWLIRKQVKQILCGVY
LIQRWWRQVLFLESRKRSVIVIQAHVRGWIARQTAARNKKRITIIQSYVKAYLLRKRSKQ
EITDDIMCLINRLIAAVSQRSISTIRQICATLSTATEHSEKCCQTIVNAGAVEILLKQIN
LLNRGVPDQEVLKQVLFTLRNIARFRNLQPVLANTPQAVEIVFQELLRSKTEGFFVACDI
LKRLCESEEGHKIARALKRHIRRLGCLVQELEKKVDLDKRNGRTGVAKDNNLRRLGEAVT
LHHLLTNDHC
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgggagccggcggtctcctcccccttccgcgacctctccaacctccgcacc
ccgaaccccagggcgccgcctaaccccaaatcctccgcctccaaggaggaacccctccct
tccgccaccccgacgacccggcgccggcgggggcctcctcctcctcctcgccccggcgcg
gcgaccgcgacgcccctcgcccgccgcctccgcgcgctcgagctcgaccagtcgcgatcc
gcccgccgcgccgagtccggccgcgacggcgccctccgcgccttcgcctcctccgccacg
tcgtggctctccctgctcctccgggacccctcggcctgcggctgcgcgccttccgcggcc
gtcgccagggtcacccgcgacgctcctgctcacggcgtgcagggcaagcgcgacgcggtc
gatggggagcgcgcgcgtgggcggagcccgaagcggcaccggggtggtgaggatcgcggc
gggccggggccgaggaggaagacgatgacgccggccatggcggcttcgttgagggattcc
ctgagggaggtgtgcagcctggatgacgtgacggagaggatgggcagccacatgagcagg
gaagcgtgcgaggaggtgctcgtcatgatgtgccaaatctgcaaaaacattgataatggg
aggttaaagatgaaagaacattgcccccttgtttctgatctcaggctgagagataaagca
ataagaatcttcatgtgttacaatcctaagtggctcaggataggactgcatattgtcctt
gggggtgattcctggatacagaatgaatcgcagaaaaaggacaaggaagttgcctttctg
aaatttgttctggagaagcaattgtttgttcatatgaatacacaaccttccgctctcaac
aaggcgcccgaggggcaccgtagagcatgttatgctgaagcggccagcaacagtatactg
aaaaggttatttcttcttgttgctgccttagacagagctaaaatagaaagtggtttacct
tcggaatctggaatcgatggcctcgatggtggatcccctttgttattttgtcgccagacc
gaaataaagtctagtcggcaaattgttcaggagtcattgggggaagtcatgcatggagaa
ggtgatctattgatgcatctcaatatcatgggatataaattgaattatcagcagcttgct
ctatcagagtatgatttcactgtaggaaatttatttgaagatcttcaagatggcataatt
ctctgtagaattattcagctgctaacatctgatgcatcgattattttgaaagtgattgct
ccatcagatacatataagaaaagattgcataactgcaccatggcaatccaatatatcaag
caggctgggtttccgttgtctgatgcagatggactctcaatctctgcggaagacattgcc
aatggggataaggagctaattctagcgttgctttggaacatgttcatttatatgcagtta
ccagtgttagtaaatgaaacttcagtagctcaggaaatatcaaggctaaaggcaccagta
tcagaacaatcaatctctgaaatgaagtcacagactggtttgctttatgattggattcag
gttgtatgtgcaaaatatggcattagtgtggaaagttcttcccaaattgacaggagagct
ctgaattacttcatcagctattatttgaacatcaatattcctaattttcctttgaaggaa
acattatctgattgtcgaaaggaattgttcagttgtcataaaacagacatgattgctgat
atcaccacttatcaattcaacaacattggaaaagtgcttgcacaatttcttcaggaccta
cctggttgggatatcctagctaatgatgtattatttgatggaaaaagtgcaataattctg
ctcgcattcctatcttcacatctgactaatgtcagacgattggagcaactaaagaatctg
atcgattcaaagttggatcatcaaagtctggttactgaggtttctcctaggcgtagatct
cgaggaacaaatgacatgaagtgccattttcctcagacagaggagacagatggttcacgc
agtacccgagagtgggctgcaacagttatacaaactcaagctagaagacttaatgcaatg
agcaaatactgtaagcttaagaatgcaacacagccatgcaacaaggggcatgatcctgct
tcatccagtcctctgaagagcattgctgatagtagctgcatagattcagccactaagctt
gtgtgtgaggatgatgtggactgcagcagcaattcctgtcaagttttgttctatcatgat
ccagtatctaccaaggtcgacttcctgttctgcaggaaggcaatggctgctcgaaagata
cagtttgcctatagaagatttgcccacagaatacgttcaagaatttcggctgcaattaag
atccaaagccattggcgctgtttctctgtgcggatacatttcaaaaggcaaattcaaaat
attactaccatccaagctgtagcgaggtgtgttttgtgccaccgggattttcagaagcaa
cgccatgctgcaatagtgattcagagaattttcagaggatggttagccagaaagaaacta
ctaggctcttggtcaccgggatctggtataaacttttgtgcactagatcaaaatcagcat
aaaatatctcatcaaagtacacagctgaagattgtgctatattcagtcctaaggttacaa
agatggtggagaaaggtccttttaaatcggtctatcagaacatcagcaatctcagttcag
tcctttgttcgtggctggttgattcgaaaacaagtaaagcaaattctatgcggcgtctat
ctcattcaaagatggtggaggcaggttctatttcttgaatcaaggaagagatctgtgatt
gttatccaggctcatgtccggggatggattgcacggcagactgctgctagaaacaagaag
cgtataactataattcagtcctatgttaaagcttatcttctgaggaaaagatcgaagcaa
gaaattaccgatgacatcatgtgtctgatcaacagactgattgctgcagtatcacagcgg
agcatcagcactattcgacagatttgtgcaacattaagtacggctacagagcattcggag
aagtgctgtcagacaattgtcaatgctggtgctgtcgaaattctgctgaagcaaatcaat
ttgctgaaccgtggagttccagaccaagaagtcctgaaacaagtgctcttcactttgaga
aacatcgcacgattcaggaaccttcaaccagtgctagctaacactccacaggcagttgaa
attgttttccaggagttgctgaggagcaaaacggaagggttcttcgtcgcgtgtgatatc
ttgaagaggctatgcgagtcggaagaaggccacaaaatcgcacgagctctgaagcgccac
atcagaaggctgggctgcctggtgcaagaactcgagaagaaggtggatcttgacaagagg
aacggacgcaccggagtcgctaaggacaacaatttgcggcggctcggggaggctgtcacc
ctccaccatctgctcaccaacgaccattgttga
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