Oryza glaberrima (African rice): 127778546
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Entry
127778546 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127778546
KO
K20222
importin-5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127778546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127778546
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
127778546
Pre-60S particles
127778546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
IFRD
RIX1
HEAT_EF3_N
INTS7_N
MMS19_C
Cnd1
Adaptin_N
Arm
HEAT_Maestro
Htt_N-HEAT_1
ARM_ECM29_C
TPR_TNPO3_IPO13_3rd
ARM_ARMC5
PPP2R1A-like_HEAT
MAP17
HEAT_PBS
Motif
Other DBs
NCBI-GeneID:
127778546
NCBI-ProteinID:
XP_052161126
LinkDB
All DBs
Position
7:complement(20775597..20784615)
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AA seq
1123 aa
AA seq
DB search
MASGDDQAAAAALLGGDPAAFDALLSTLMSSSNADRAAAEAAFHRLRGSHPEPLALRLAS
SLSSPATPADLRAMAAVLLRKLLSPTPSSDASSAAAAPVWPHLSPAGQAALKQHLLSALQ
SDPPKPIAKKVCDAISELAALLLPENAWAELLPFLFRAASGPEAPNLQESALLIFARLAD
YIAESLLDHLMTIHNLLASALAHLTSPDVRIAALSAAVNLVQCLPTNADRDKMQDLLPAM
MRALTDCLNSGQEASAQEALELLVELAGAEPRFLRRQIADVVGAMLQIAEAAQLEDGTRH
LAVEFVITLAEARERAPGMMRRLPQFVGRLFAVLMQMLLDVEDDPAWHTAETEDEGAGEG
NNYGVAQECLDRLAIAIGGNAIVPIASELLPQYLSAPEWQKHHAALITLAQIAEGCAKVM
LKNLEQVVSMILNGFQHPHARVRWAAINAIGQLSTDLGPDLQVNYHQQVLPALANAMDDF
QNPRVQAHAASAILNFSENCTPEILTPYLDGIVTKLLVLLQNGKQMVQEGALTALASVAD
SSQEHFKKYYDAVMPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKDKFRDDAKQVM
EVLMSLQGTTMENDDPITSYMLQAWARLCKCLGQDFLPYMNVVMPPLLQSAQLKPDVTIT
SAESDDDIESDDDSIETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFFPWIDQV
APTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLAVEKGLAQGRDESYVKQLSDYIIPALV
EALHKEPETEMCSSMLDSLNECMQLSGRLLDENQVRAVSDEIKNVIIASATRKRERSERS
KAEDFDADEGELLKEENEQEEEVFDQVGECLGTLIKTFKASFLPFFDELSVYITPMLGKD
KTAEERRIAICIFDDIAEQCRESALKYYDTYLPFLLEASNDENSDVRQAAVYGVGVCAEF
GGHVFRPLVGEALSKLNNVITHPEAKHADNIMAYDNAVSALGKICQFHRDGIDAAQVIPA
WLGCLPIKDDKIEAKVVHDQLSSMVERSDADILGPHSQYLPKIVSIFAEVLCNGTELATD
ETTKRMVNLLRRFQQTLPPDFLASTFSSLQPQQQLLLQSILST
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggggatgaccaggcggccgccgcggcgctcctgggaggggacccggcggcg
ttcgacgcgctgctctcgacgctgatgtcctcgtcgaacgccgaccgcgccgccgccgag
gcggcgttccaccgcctccgggggtcccacccggagccgctcgcgctccgcctcgcctcg
tcgctgtcgtcgcccgccacgcccgccgacctccgcgccatggccgccgtcctcctccgc
aagctcctctccccgacgccctcctccgacgcgtccagcgccgccgcggcgccggtgtgg
ccccacctctcccccgcggggcaggccgcgctcaagcagcacctcctctcggcgctccag
tccgacccgcccaagcccatcgcgaagaaggtatgcgacgccatatccgagctcgccgcg
ctcctcctgccggagaacgcgtgggccgagctgctccccttcctgttccgcgcggcgtcg
ggacccgaggctcccaatctgcaggagtccgcgcttctcatcttcgcgcgcctggcggat
tacatcgctgaatcgcttctagaccatctgatgacaatccacaacctgctcgcctccgcc
ctggcgcacctgacatctcctgatgtgcgcatcgccgcgttgagcgctgcggttaacctc
gtccagtgcttgcccaccaacgctgaccgtgataagatgcaggatttgcttcctgcaatg
atgagggcgctcacggattgcctaaactctggtcaggaggcctctgcacaggaggcgctg
gagctgcttgtggaactggctggtgcagagccaaggttcctgcggcggcagattgcagat
gttgtaggtgcaatgctgcagatagctgaggctgcacagctggaggatgggactaggcac
ctcgctgtagagtttgtgattactctcgctgaggccagggagcgtgcaccaggaatgatg
cgtcgcctcccgcagtttgttggcaggttatttgcagtgctcatgcagatgttgcttgat
gtcgaggatgatcctgcttggcacactgcagagacagaggatgaaggtgcgggtgaagga
aataactatggagtagcacaggagtgccttgaccgtctagccattgctattggtgggaat
gcaattgtgccaattgcatctgagctgctcccgcagtacctttccgctcctgagtggcag
aagcaccatgctgcactaatcacacttgcacagattgcagaaggatgtgcgaaggtgatg
cttaaaaatctggagcaggttgtttcgatgattttgaatggatttcaacatcctcatgca
cgtgtgcgttgggctgcaatcaatgcaattggtcagctatctactgatttgggtccagac
ttgcaagttaattatcaccagcaggtgctgcctgcattggcaaacgccatggatgatttt
cagaatccacgggtgcaagcacatgctgcatcagctatcttgaatttcagtgagaattgc
acgcctgaaattctgacaccttacctggatggaattgttaccaaattacttgttcttctt
cagaatggcaagcaaatggtgcaagagggagcattgacagctttagcatcagtagctgat
tcatcgcaggagcacttcaaaaaatactatgatgcagtgatgccatacctgaaagctatt
ttaatgaatgcaactgataagtccaataggatgcttcgtgccaagtctatggagtgtata
agtctggtcggaatggctgtaggcaaggataagttcagggatgacgcaaagcaggtcatg
gaagtacttatgagtttgcaaggaactacaatggaaaatgatgatccaataacaagctac
atgcttcaggcttgggccaggttatgcaaatgtctcgggcaggattttcttccgtacatg
aatgttgttatgccaccactgcttcagtctgctcaactgaagcctgatgtcacaattact
tcagctgaatctgatgatgatatagaatcagatgatgatagcattgaaacaattacgctt
ggcgacaaaagaataggtatccgaactagtgtactagaagagaaagcaacagcttgcaac
atgctgtgctgttatgctgatgaactcaaggaggggttcttcccatggattgatcaggtt
gctcctacattggttccactccttaaattttactttcatgaggaagtgaggagagctgct
gttgcagctatgcctgaactactacgttctgcaaaattggctgttgagaaggggctggct
caaggacgcgatgaatcttatgttaaacaattatctgactacataattccagctcttgtt
gaagcgctgcacaaggaaccagaaactgagatgtgttcatccatgcttgattcattaaat
gagtgcatgcagctctctggtcgactccttgatgaaaaccaagtaagagctgtttcggat
gagataaaaaatgttattatagccagcgctaccaggaaaagagaaaggtcagagagatca
aaggcagaagattttgatgctgatgaaggagaactactcaaagaagagaatgagcaggag
gaggaagtgtttgatcaggttggagagtgccttggtactttaattaagaccttcaaagct
tcttttctgccattctttgatgaactgtctgtatacatcacacctatgttgggaaaagat
aagactgctgaagagagaaggatagctatctgtatatttgatgatattgcagagcaatgt
cgtgaatctgctctcaagtattatgatacatacctaccttttctgctggaggcatccaat
gatgagaactcagatgttcggcaggctgctgtctatggtgtgggtgtatgtgctgaattt
ggcggtcatgtgttccgcccacttgttggagaggcgctgtcaaagttgaacaatgttatc
acacatcctgaagcaaagcatgcagacaatataatggcatatgacaatgctgtttcagcg
cttggtaaaatatgccaattccatcgtgatggtatcgatgcagctcaggtcattcctgcc
tggcttggttgcttgcctataaaagatgacaagattgaagcaaaagttgtacacgatcag
ctctcctcaatggttgaaagatcggatgcagatattcttggtcctcatagccaatatctt
ccaaaaattgtttcaatttttgcggaggttttatgcaacggaacagagcttgctacagat
gaaacaaccaagcggatggtcaatctcttgaggcgtttccagcagacattgccaccagat
tttcttgcctcaacattttccagcttgcaaccacagcagcagcttctgctgcagtccatt
ttgtcgacatag
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