KEGG   Oryza glaberrima (African rice): 127778712
Entry
127778712         CDS       T08853                                 
Name
(RefSeq) glycine-rich RNA-binding protein 3, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127778712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127778712
   03041 Spliceosome [BR:ogl03041]
    127778712
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127778712
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127778712
Spliceosome [BR:ogl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127778712
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 127778712
NCBI-ProteinID: XP_052161294
LinkDB
Position
7:complement(22030427..22033660)
AA seq 446 aa
MAFAGRVVNALRRTSVSSNPSLLQAVRCMSSKLFVGGLSYATDDTTLKDVFSHYGDVLEA
RIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTANDRAGGIRGGGGF
GAGGYGSGGGYSSGGGYGTGEYGRGGGYAGNGGYGGRASEYGGYGAGGYSSSGGYNATSV
PHGNAGGYGSSGVSHGNAGDYRSSDVYNTTNTYGSGNFSHSGQSGGSFGGNNGGISGGRF
GAAGSSNLHNSANFSHGGQSSDGGSNGGNSASNFGQGGGFGENSGGYNSGQFGAAGHSNG
GYSASNFSNASFGANSSVFSSGQSGATGRNNGGNSASNFSLGGSFGANNGGISSGQFGAV
GHSNGGYSTSNFSRGNGFGANSGGSSNGQYGAAHGNNGSNFSHGGGFGANNGGYSSGQFD
VAGVGNMVINRHILIQNVKTIISENM
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggctttcgctggtagagttgtgaatgcgctcaggaggacttcggtctcgtccaacccg
tcgctgctccaggcagtaagatgcatgtcctcaaagcttttcgttggaggactttcgtat
gccacagacgacaccaccctcaaggatgtgttttctcactacggcgatgttcttgaagct
aggatcatcattgatagggacacaggaaagtcaaaagggtatggatttataacttacaca
tcaagcgaggaagctgcggctgccgttactgccatggatggcaaggatcttcaaggacga
attgtaagggtcagcaccgccaatgaccgtgctggtggaatacgtggaggtggtggattt
ggcgctggtggttatggaagtggcggtggatatagcagtggtggtggatatggtactggt
gagtatggcagaggtggtggatatgctggcaatggtggatacggtggcagggcttctgaa
tatggtggttatggtgctgggggatacagcagtagtggaggctataatgctaccagtgtt
cctcatggaaatgctggtggctacggtagctctggtgtgtcccatggaaatgctggtgac
tacagaagctctgatgtttacaatactaccaacacctatggctctggcaacttcagccat
agtggtcagtccggtggcagcttcggtggaaacaacggtggaattagtggtggacgattt
ggtgccgccggtagcagcaacctccacaactctgccaacttcagccatggtggtcagtcc
agtgatggtggcagcaacggcggcaactctgctagcaactttggccaaggtggtggcttt
ggtgaaaacagtggtggatataacagcggacaatttggtgccgcgggtcacagcaatggc
ggctactctgctagcaacttcagtaatgctagctttggtgcaaacagtagtgtatttagc
agtggacaatctggtgccaccggtcgcaacaacggtggcaactcggccagcaacttcagc
ctcggtggcagctttggtgcaaacaatggtggaattagcagtggacaatttggtgccgtg
ggtcacagcaatggaggctactctaccagcaacttcagccgtggtaacggctttggtgca
aacagtggtggatccagcaatggacaatatggtgccgcgcatggcaacaacggcagcaac
ttcagccacggtggcggctttggtgcaaacaatggtgggtatagcagcggacaatttgat
gttgcgggtgttggaaatatggtcataaatcggcatattttaatccaaaatgttaaaaca
ataatcagtgagaacatgtaa

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