KEGG   Oryza glaberrima (African rice): 127778771
Entry
127778771         CDS       T08853                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127778771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127778771
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ogl02044]
    127778771
Membrane trafficking [BR:ogl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127778771
Secretion system [BR:ogl02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   127778771
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd TPR_Sec16 WD40 Beta-prop_EIPR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_HPS5 EIF3I TPR_GEMI5 SRA1 Beta-prop_WDR35_TULP_N ANAPC4_WD40 MIOS_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Prp18 WD40_RFWD3 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 127778771
NCBI-ProteinID: XP_052161350
UniProt: I1QCT9
LinkDB
Position
7:24650858..24660898
AA seq 1127 aa
MACIKSAQRAALTALAPEAPYLAAGTMSGAVDMLFSASANIEIFRLDFQSDSPDLPLLAS
APSPDRFNRLSWSRPGAADGDSFSLGLLAGGLSDGSVAVWNPLSMINSEGKAEDALVARL
EKHTGPVCGLEFSELTPNRLASGAEQGELCIWDLKNPSEPVVFPPLKSVGSSAQAEISYL
TWNPKFQHILATASSNGMTVVWDLRNQKPLTSFSDSNRTKCSVLQWNPDMSTQLIVASDD
DNSPSLRVWDVRKTISPVREFVGHSKGVIAMSWCPYDSSYLLTCSKDNRTICWDTVSGEI
MSELPASSNGNFDIHWYRKIPGVVAASSFDVKIGIYNLEFSGLYAAGDSAIGAPARPRAP
APKWLKCPTGASFGFGGKLVSFHQAAPTQGAQVTTSEVHVHNLVIEQSLVSRSTEFEAAI
QNGDKSSLRALCDKKAQESLSDEERETWGFLRVMFEDGDAARTKLLAHLGFNPPQEQTSS
STDELNRTLADTLNLDHGAPTDTSDSQFMVDNGEDFFNNPQPSETSLAEESISTNGQQIE
QEMPVNVEPSDPSVDKSIQHALVVGDYKGAVNLCLAANRMADALVIAHAGGSALWESTRN
QYLKNTVSPYLKVVSAMVGNDLMSFVSTWPLNAWKETLALLCTFARKEEWNVLCDTLASR
LLGVGDTLAATLCYICAGNIDKAVEIWSRDLKSEDGGKSYVDLLQDLMEKTITLALATGH
KSFSASLSKLVENYAELLASQGLLKTAMEYLKLLGSDEHSHELAILRDRIAFSTEENHAA
STSVHAGSINSSAYPTIQPSYSTPDPSQNLYQGTSQYAVPSNQYQDYQQQSNTAYGTYNS
TYSQQQTQMFVPSNTTPVISQPNATPAPVPQQPVKAFTPTNLPGLKNPEQYQQPTLGSQL
YAGANPPYTSGQSTPYQGVPPTTYHQPRPPTQFQTVPTAPPAVSSATVPGTTPSQMFPGP
VANNPTSRFMPSNNPGFVQRPGLSPVQPSSPTQAQGQPQPVVAPPAPPATVQTADTSKVS
AELKPVIATLTRLFDETSKAMGGSQVKKREIEDNSRKIGTLFAKLNSGDISPNVSSKLIQ
LCSALDSGDFATAMHLQVLLTTSDWDECNFWLAALKRMIKTRQNFRM
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggcgtgcatcaagagcgcgcagagggcggcgctgacggcgctggcgccggaggcgccc
tacctcgccgccggcaccatgagcggcgccgtcgacatgctcttctccgcgtcggccaac
atcgagatcttccgcctcgacttccagtccgactcgcccgacctccccctcctcgcctcc
gccccttcccccgaccgcttcaaccgcctctcctggtcccgccccggcgccgccgacggc
gactccttctccctcggcctcctcgccggtggcctcagcgacggctccgtcgccgtgtgg
aatccgctgagcatgatcaactccgaggggaaagcggaggatgccttggttgcgaggctc
gagaagcacaccgggccggtttgcggactggagtttagcgagctcacaccgaatcggctc
gcctcaggggctgaacagggggagctttgcatctgggatctcaagaacccctccgagcca
gtcgtgtttccgccactcaagagtgttggctccagtgctcaagctgaaatatcttattta
acctggaacccgaagtttcagcatattctagcaaccgcttccagtaatgggatgacagtt
gtttgggatttaagaaaccaaaaaccgttgactagcttttcagattcaaacagaacgaaa
tgttctgttcttcaatggaaccctgacatgtccacccagctaattgttgcatcagatgat
gataactctccatctttgagagtttgggatgtgaggaaaaccatttcaccagtaagagaa
tttgtgggacactcaaaaggtgtaattgctatgtcgtggtgcccctatgatagttcatac
ttgcttacctgttctaaagataatagaacaatatgctgggatactgttagtggagagatt
atgagtgagctaccagcaagctcaaacggtaacttcgacattcactggtatcgaaaaata
ccaggtgttgttgcagcatcctcatttgatgtgaaaatcggcatatacaacttagagttc
tctggcctttatgcagctggtgatagtgctattggtgccccagcacgcccaagagctcca
gctccaaaatggttgaaatgccccactggcgcatctttcggctttgggggcaaacttgtt
tctttccaccaagcagcgcccacccaaggtgcacaagtgactacttcagaggtgcatgta
cataatttggtgattgagcaaagtctggtaagccggtcgactgaatttgaagctgctata
cagaatggggacaaaagttcactgcgtgctctgtgcgataaaaaagcacaagaatctcta
tctgatgaggagagagaaacatggggcttcctaagggtaatgtttgaggatggggatgct
gccaggacaaagctgcttgctcatcttggctttaaccctcctcaagaacagacttctagt
tcaacagatgaactgaacagaacattggcagatactcttaaccttgatcatggcgcgcca
actgatacatcagattctcaatttatggttgataatggggaagatttttttaacaatcct
caaccttcggagactagtttggcagaagaatcaatttctacaaatggtcaacagatcgag
caggaaatgcctgtaaatgttgaaccatcagatccatcagttgacaaaagtattcaacat
gcactggtagttggtgattataaaggagcagtcaatctgtgccttgctgccaatcgaatg
gctgatgctctggttattgcccatgctggtggttctgctctatgggaaagcacaagaaac
cagtatcttaagaatactgtatcaccctatctaaaggttgtttctgctatggttggcaat
gatttgatgagttttgtgagtacatggccattgaatgcttggaaggaaacacttgcgcta
ctgtgcacatttgccaggaaagaggaatggaatgttctatgcgatacccttgcatctaga
ctgttgggagttggagatacactagctgcgactctctgttatatttgtgctggaaatatc
gacaaagctgtggaaatatggtctcgcgacttgaagtctgaagatggtgggaagtcttat
gttgatcttctccaggatttgatggagaagaccattactcttgcccttgctacagggcat
aagagctttagcgcgtcactgtctaagcttgtggaaaactatgcagaacttttggccagt
caaggccttcttaaaactgcaatggaatacttaaaattgttgggatcagatgaacattca
cacgagctggcaatattgagagaccggattgcattttctacagaagagaatcatgctgcc
agtacttcagttcatgcgggcagtattaacagttccgcgtaccctacaattcaaccgagc
tatagcaccccagacccttctcagaatctttaccaggggacttcacaatatgctgtgcca
agtaaccagtatcaagattaccagcaacaatctaatacagcatatggaacatacaacagt
acatattctcaacaacaaacccagatgtttgttccatcaaacaccactccagtgatctcc
cagccaaatgcaactccagcaccagttccacaacaaccagtgaaggcatttactcctacc
aacttgccaggtctaaaaaatcctgagcaataccagcaaccaactttgggctcccagctt
tatgcgggtgctaatccaccatatacttctggacaatcgactccatatcaaggtgtacct
cccaccacataccatcagcctagaccacctacacaattccaaacagttcccacagcacct
ccagctgtttctagtgccactgtaccaggaacgaccccaagtcagatgttccctggtcca
gttgctaataacccgacttccagatttatgccatcaaacaatccaggttttgttcaaagg
ccaggtttgagtcctgtacagccctcaagtccaacacaggcacaaggacaaccgcagcct
gttgttgcacctcctgcacctcccgcaactgtgcagacagctgacacatcgaaggtgtct
gctgagctgaaaccagttattgctacattgactagactatttgatgaaacatctaaagct
atgggtggatcacaagttaaaaaacgtgaaatcgaagacaactcaagaaagatcggaaca
ctatttgcaaaactcaattctggggatatatctccaaacgtttcatcaaaactcattcag
ctttgcagtgcacttgatagcggtgattttgccactgcgatgcaccttcaggtacttctg
acaacgagcgactgggacgagtgcaacttctggcttgccgcattgaagcgtatgatcaag
acgaggcagaatttcagaatgtaa

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