Oryza glaberrima (African rice): 127778878
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Entry
127778878 CDS
T08853
Name
(RefSeq) KH domain-containing protein HEN4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127778878
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127778878
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
127778878
NCBI-ProteinID:
XP_052161481
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Position
7:complement(13029593..13036782)
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AA seq
679 aa
AA seq
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MAGARPFFSPHEAFARASTASSPAAAATVAVAAPAPDPSPATGHADAAEVAVFRLLLPQA
FSDADAMRLYAAIAPLRRLFPTLQVRVETLGVGASSDDADGDGDGGGGGGGGRVAVVLGP
ASPARRVEASSSSGEPLELSPAQEALVALLDSGWVVHLNGEAWGAERMTCLVLVEAGRLE
AASGKGILWTIANESGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGTTVRRALVSVSSC
LQGDGPLGSSTSAHSVNPILTQTFPKVPEPEMGSLYSDMSTERANTSIPHIDCPQGATGI
EQTECVMQFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSA
LEKPGQKFSMVENAVLRIFDRMQVVESNMHSRPSNPLHCSARVLILKGQFGYLVGPGGSL
IKHMNNTTRTKMKILEETAVPACASQYELVLQITGEPMNVRDALSLVCEKLRNHCFSSEK
TTYGNGHVPSSAIDELTTSSQVNISSTGQYSAGNLSRVDHRLSQNEIDSVQNSISAFDLG
RLGSPQIQKPTIGCGTEINNPINEVEKPANGNGTGINNLNTEMQNENGIDVSNHGATSLE
EKKLLRGIKTATITRITYEVAVCGDNGNDFTMIREMSGADVTAHYPLPETSDGMIVISGT
PDEAQSALAMFLDLVKEGQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcgagacccttcttctcgccgcacgaagccttcgcccgagcctcgacggcc
tcctcacccgcggccgccgcgaccgtcgccgtcgcggcacctgctccggacccaagcccc
gccaccggccacgccgatgctgccgaggtcgccgtcttccgcctgctcctcccccaggcc
ttctccgatgccgacgccatgcgcctctacgccgccatcgccccgctccgccgcctcttc
cccacgctgcaggtccgcgtcgagaccctcggagtcggagcctcgtccgatgatgccgac
ggcgacggcgacggcggaggtggtggtggtggtggtcgcgtcgccgtcgtcctcggcccc
gcctccccggcgcgccgcgtcgaggcctcctcgtcctccggggagcccctcgagctctcc
cccgcgcaggaggccctcgtcgccttgctcgacagcggctgggtcgtccacctcaacggc
gaggcgtggggagcggagcggatgacgtgcctcgtcctggtcgaggccgggcgcctcgag
gcggcctccgggaaggggatcctgtggacgatcgccaacgagtccggcgccgaggtgcgc
gtcacgccgtggggtggtgagggcggggcggcgtacgcggcgcagccgcccgaggaggtc
gtcgagataacaggagatggaaccactgtaaggagagctcttgtttctgtgtctagctgt
cttcaaggtgatgggccacttggcagctcaacttctgctcattcagtgaacccaattctc
acacaaacatttccaaaagtgcctgagcctgaaatgggatctttgtattcagatatgtca
actgagcgtgcaaacaccagcattcctcatattgattgtccacagggtgctacaggaatt
gaacaaactgaatgtgtcatgcaattttcatttagactactctgccctgtaactcttgct
ggaggtttgataggaaagaatggcatggttatcaaagcaattgaagttaactctggtgct
tctgttgatgtcggtggacctgttcatcggtgcatggaacgtgcgataacagtatcagcc
ttggagaaaccaggacagaaattctccatggtggagaatgcggtacttcgtatatttgac
agaatgcaggtggtggaaagcaatatgcattcgagacccagtaatccattgcattgctct
gccagggttctaattctgaaaggccaatttggttatttagttggtccaggtggttcacta
atcaagcatatgaataacacaacaagaacaaaaatgaaaattttagaagagactgctgtt
ccagcttgtgcctcacaatacgaactagttctgcagatcactggagagccaatgaatgtt
agagacgctttatctcttgtttgtgagaaactacgtaatcattgcttctcttctgagaaa
acaacctacggcaatggtcatgttccctcatcggctattgatgaattaactacaagcagc
caggttaatatctcttcaactggtcaatattcagctggcaatttgtcaagggttgatcac
aggctttctcagaatgaaattgactcagtacaaaactctatcagcgccttcgacttggga
cgtttgggctccccacaaattcagaaacctaccattgggtgtggcactgagatcaacaac
ccaattaatgaggtggagaaaccagctaatggaaatggcactggaattaacaatttgaat
actgagatgcagaatgaaaatggaattgacgtttcaaatcatggagctacatctctggag
gaaaaaaaacttttgagaggaatcaagactgccaccataactaggatcacatatgaggtt
gctgtttgcggagataatggaaacgacttcactatgattagagagatgtctggtgcagac
gttactgcccactacccgcttccagagacgagtgacgggatgatcgtgatatctggaacg
ccagatgaggcgcaatcggctctggccatgttccttgaccttgtcaaagaggggcagtga
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