Oryza glaberrima (African rice): 127778936
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Entry
127778936 CDS
T08853
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1-like isoform X1
KO
K12191
charged multivesicular body protein 2A
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127778936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127778936
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127778936
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
127778936
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127778936
Exosomal proteins of other body fluids (saliva and urine)
127778936
Exosomal proteins of colorectal cancer cells
127778936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
DUF3502
PWI_CCDC43
PspA_IM30
Fungal_trans_C
IFP_35_N
Motif
Other DBs
NCBI-GeneID:
127778936
NCBI-ProteinID:
XP_052161545
LinkDB
All DBs
Position
7:7462872..7468077
Genome browser
AA seq
250 aa
AA seq
DB search
MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMKLDN
LPMKWWKVVDEQFHFAAKNGQGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKS
TQAMGDAMKGVTKAMGQMNRQLNLPGLQRIMMEFERQNERMEMTSEVMGDAIDDALEGDE
DQEEETEELVNQVLDEIGIDINQELVKAPSAAVAQPAAAGKVAQAESAGGNGDGGIDADL
QARLDNLRRM
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttgttcgggaagcggaagacgcctgctgagctcttgagagagaacaagaga
atgctggatcgatcaataagggaaattgaacgagaaagacagggattgcaagcccaggag
aaaaaactcattactgagattaagaaaacagcaaaggaaggccagatgaaattggataac
ctgccgatgaagtggtggaaggtcgtggatgaacaatttcactttgctgctaaaaatgga
cagggtgctgtcaaagtaatggccaaagatcttattcgaacacggcatcagatcacaaag
ttttaccaacttaaatctcagcttcaaggagtttctctaagagttcagacgctgaaatct
acacaagctatgggtgatgccatgaaaggtgttacaaaggctatgggtcagatgaacagg
cagttaaatctgccaggattacagaggattatgatggagtttgagcgacaaaatgagaga
atggagatgacgagtgaagtcatgggggatgctatagatgatgctttggagggagatgag
gatcaagaggaagaaactgaggagcttgtgaatcaagtccttgatgaaattggcattgat
attaaccaagagcttgtaaaggccccttcggctgccgtcgctcagcccgcagcagcagga
aaggttgcgcaggctgaatctgctggtgggaatggtgacggtggaatcgacgcggatttg
caggcgaggctggacaatctgaggagaatgtag
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integrated database retrieval system
