KEGG   Oryza glaberrima (African rice): 127779036
Entry
127779036         CDS       T08853                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogl03036]
    127779036
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127779036
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127779036
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127779036
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 127779036
NCBI-ProteinID: XP_052161671
LinkDB
Position
7:4265863..4275917
AA seq 1143 aa
MAKVAVGQWVPHVEAFVDVSRPPAQHSASVDALSALVNKDKLTLFDLVSKMEMYLTTTDH
IVRSRGILLLGEILCRISFKQLDVNAISTLSDFFISRLSDWQALRGALVGCLALLHRKQT
VGSIIIADVKRLLETFLQNVQVQSLAAADRKLCFQILNYILDHYPEAVKTMGDELLYGMC
EAIDEEKDPECLKLSFNLVEAVMKLFPDPSGLAAQYASEVFEILSKYYPIYFTHGVGDDL
DATRDDLSKALMHAFCSTPYFEPFAIHLLLDKLSSSLPLAKLDSLKYLDNCIRCYGADRM
GRHVTTIWFKLKEVIFSLSIDQILSTSGAKDMEKNKNEIVSEALTCLKTAITQMGPSDED
RLINLILLDEDIVSSIHSVASEEASGLTSLQNPIQLHALGSVISILAESSAYFCTRVLQA
HFARLVDSLEISAGRESQHLNNCSGPSSGAINYGALYLSVQMLSSCREVALTYKEEFSPI
KSAKESWWLILEKKMDSLIHILQSLLTIDSQSVQSADRQEYVSCAVKGLIILATFPEPRL
PLSASAYEDVLLTLTSVIMSKYENMHLWRLSLKALTTIGSSIVEFHASQKENIYNKVVVD
KISSLDEPCRTSIPLNLRLEACFEVGTSGSNCMLRVAKSLEEAVVGNISEVNGRVKCSEY
VVNLLECYCGRVLPWLFNFGGVNELALNFAMRLWNEIRDLATSDRIGSQDLLSSLMMGMK
LVIGICTEEQQSLIVQKAYDTISSMLSLPVKSMTRHLLAVDEAVPLYSVRDTFLMCMLSS
VIVGLRPQTPVPDMLMIINLFTVFLLKGQIPAAHALASIFNKNLHNSEFSHENKLDKVID
TILERCFSTISVRSNMKTSLSCAGRSDDANCSEILSGSIESKDDIISGLAWLGKGLLMSG
DEKVKDVSLFLLKCLCSDQSLAGISSHQEEHGISDSSYASLATSAADAFHVMMSDSEVCL
NKKFHARIKPLYKQRFFSILMPIFLSKIKESTVMTTKLVLYRAFGHIISNAPVPAVITEA
HRILLVMVDSIAKLSQDVKDKDLVYSILLVLSGMLMDEKGKECIVENIHIIVSVLTQLVS
YPHMMVVRETALQCLVAMSSLPHSKIYRMRPQILQAAIKALDDKKRRVRQEAVRCRQTWQ
SFA
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggcgaaggtcgctgtcggccagtgggtaccccatgtggaggccttcgtcgacgtctcc
cggcccccggcccaacactctgccagtgtggatgccctttctgccttggtgaataaggac
aagctgactctctttgatttggtgtcaaagatggagatgtacttgacgacgactgaccac
attgttagatccagaggaatcttgcttcttggggaaatattgtgtcgaatttcatttaaa
cagttagatgttaatgctatttcaacattgtcagacttctttatatcaagattgtcagat
tggcaagcacttcgaggagcacttgttggatgtttggccttgttgcacagaaaacaaact
gttggtagtatcatcattgctgatgtcaaaagacttctcgagactttcttgcagaatgtt
caagtccagtcacttgcagctgctgaccgcaagctatgctttcaaattctgaactacata
ctggatcactaccctgaggctgtcaaaacaatgggtgatgagcttctgtacggaatgtgt
gaagcaattgatgaagaaaaggacccggaatgcttgaagctttcatttaatttggtcgaa
gctgtcatgaagctatttccagatccatctggtttggcagcacaatatgcaagcgaagtt
tttgagattctgagtaaatattatccgatctacttcacacatggagtgggtgatgattta
gatgctacaagggatgatctttctaaggcactaatgcatgccttttgttcaaccccatac
tttgagccatttgcaattcatttgcttctagataaactttcttcctctcttccattagcc
aagcttgattctttaaaatatttggataattgcatccgctgctatggtgcagacagaatg
ggtagacatgtaaccactatttggtttaagttgaaagaagtgatatttagcctgtccata
gaccaaattttatcaacctcaggggctaaagacatggagaagaataagaatgaaatagta
tcagaagctctcacttgtttgaagacagctattactcaaatgggtccttcagatgaagat
cgtttgatcaatttaattttactggatgaggacattgtaagtagcatccattctgtggca
agtgaagaagcctctggtttgacttcattgcaaaacccgattcaactgcatgcccttgga
agtgtcatttctattcttgctgaatcatctgcatatttctgcactagagttcttcaagcg
cattttgcacgcttggtagatagtttggaaatctcagctggtcgtgaatctcagcacttg
aataattgcagtggaccatcttctggtgctattaactatggtgcactctatttatctgtc
caaatgctttcatcctgtcgagaggtggccttgacatataaagaggaattttctccaatt
aaatcagcaaaggagtcttggtggcttatcttagagaaaaaaatggactcactaatccat
attcttcaatcattactaaccattgattctcaatctgtccagtcagcagacaggcaagaa
tatgtttcgtgtgctgtgaagggtttgataatccttgcaactttcccggaaccccgttta
cctctatcggctagtgcatatgaggatgttctgctgacgcttacttcagtaattatgagc
aagtatgaaaatatgcatttgtggagattatcattgaaagcattgaccaccattggctcg
tctattgtggagtttcatgcttctcaaaaggaaaatatttataacaaagttgttgttgac
aagattagttctctggatgagccttgtcgaacttcaatacccctcaacctaagacttgaa
gcatgtttcgaagttggtacttcaggttcaaactgcatgttaagggttgctaaatctctt
gaagaagctgttgtcggcaatatttctgaggttaatggaagagtaaaatgcagcgaatat
gtagtcaatcttcttgaatgctactgtggtcgggtccttccttggttgtttaattttggt
ggtgtcaatgaacttgctttgaacttcgctatgcgtctctggaatgaaattagggacttg
gctacttcagatagaatcggatcacaggatcttcttagctcactaatgatgggaatgaag
cttgtaatcggaatctgcacagaggaacaacagtcactgattgttcagaaagcgtatgac
acaatatcatcgatgctgtctcttccagtgaaatcaatgacaagacatcttttggctgtt
gatgaggcagttcctctatactctgttcgtgatacatttctcatgtgtatgctttcatcg
gttatagttggtcttcggcctcaaacacctgtaccagatatgctgatgataattaatctc
tttacggtcttcctactgaaaggacaaattccagctgcccatgcattagcttctattttc
aacaaaaacctacacaattcagaattctcacatgagaataaactggataaagtgattgat
actattcttgagaggtgtttctcaacaatatcagtgcgaagcaatatgaagacatctctc
tcttgtgctggccgttcagatgatgctaattgctcagagatcttgtctggaagcattgaa
tcaaaggacgatatcatctctggcttggcctggcttggcaagggattgcttatgagtgga
gatgaaaaggtgaaggatgtttcactgtttcttcttaaatgtctatgctcagatcagagt
ttggctggcatttcatcccatcaggaagaacatggtatcagtgattcatcatatgcttct
cttgcaacatctgcagctgatgcattccatgtgatgatgagtgattcagaagtttgcctg
aataagaagtttcatgcaagaataaaaccactatataagcagcgtttcttctcaatattg
atgccaatttttctctctaaaatcaaggaatctactgtgatgactacaaaattggttttg
tatcgagcttttgggcatatcatttccaatgctccagtaccagcagttataacagaagcc
catcggattctacttgtgatggttgatagcatagctaaattaagtcaggatgttaaggat
aaagatctagtgtatagtatattgctcgtcttatctggaatgctgatggatgaaaaaggc
aaagaatgcattgtggagaacatccacatcattgtcagtgtccttacgcagctcgtttcg
tatcctcacatgatggttgttcgagagacagccttacaatgtttagttgccatgtctagt
cttcctcactcaaaaatttatcgcatgcgaccacagatcctacaagctgcaatcaaggct
cttgatgataagaaaaggagagttcgccaagaggctgttcgttgtcgacaaacatggcaa
tcatttgcttaa

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