Oryza glaberrima (African rice): 127779039
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Entry
127779039 CDS
T08853
Name
(RefSeq) calreticulin isoform X1
KO
K08057
calreticulin
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04141
Protein processing in endoplasmic reticulum
ogl04145
Phagosome
ogl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127779039
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127779039
04148 Efferocytosis
127779039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127779039
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ogl04091
]
127779039
Chaperones and folding catalysts [BR:
ogl03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
127779039
Lectins [BR:
ogl04091
]
L-type lectins
127779039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CDC45
Motif
Other DBs
NCBI-GeneID:
127779039
NCBI-ProteinID:
XP_052161675
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All DBs
Position
7:7912519..7916601
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AA seq
429 aa
AA seq
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MAIRARSSSYAAAAVALALALASVAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEW
NHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYV
KLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSH
VYTLIIRPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPED
KKPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKW
KAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWGK
HKDAEKAAFDEAEKKKEEEEAAKAGEDDDDLDDEDAEDEDKADEKADSDAEDGKDSDDEK
HVCNTPAFS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccgcgcgaggtcctcctcctacgccgccgcggcggtcgcgctggcgctcgcg
ctggcgtccgtcgccgccgtcgccggcgaggtcttcttccaggagaagttcgaagatgga
tgggaaagtcggtgggtcaagtcagaatggaagaaggatgagaacatggctggtgaatgg
aaccacacatctgggaagtggaatggagatcctgaggacaaaggtatccaaacctctgag
gactacaggttctacgctatttcagcggagtacccagaattcagcaacaaggataaaacc
ctggtgctgcagttctctgtaaagcatgagcaaaagcttgactgtggtggtggatatgtc
aagttgcttggtggtgatgttgaccagaagaaatttggtggggacacaccgtacagcatt
atgtttggaccagacatctgtgggtacagcaccaagaaggtccatactatctttactaag
aatgacaagaaccatttgatcaagaaggatgtcccctgcgagactgatcagctgtcccat
gtgtacactttgatcatccgtcctgatgctacatacaccatactcattgacaatgttgag
aagcaatctggcagcatctacgagcactgggatattctgcctccgaagcaaatcaaggac
ccagaagctaagaagccagaggactgggatgacaaggagtacattcctgaccccgaggac
aagaagcctgagggatacgatgatattcccaaggaaatccctgaccctgatgctaagaag
cctgaggactgggatgatgaggaagatggtgagtggactgcaccaaccattcctaaccct
gagtacaagggaccatggaagcaaaagaaaatcaagaaccctaactaccaaggcaaatgg
aaggcaccgatgatcgacaacccagacttcaaggatgatccatacatctatgcttttgac
agcctgaagtacattggcattgagttgtggcaggtcaaatcaggtactctgtttgacaac
ttccttattactgacgaccctgagttggccaagacattcgcagaggagacatggggcaag
cacaaggatgctgagaaggctgcttttgacgaggcagagaaaaagaaggaagaggaggaa
gctgccaaggccggtgaggacgatgatgatttggatgacgaggatgctgaggatgaggac
aaggccgatgagaaggctgactctgatgcagaggatggcaaggattctgatgatgagaag
catgtatgtaacactcctgcgttttcttga
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