Oryza glaberrima (African rice): 127779040
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Entry
127779040 CDS
T08853
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127779040
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127779040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127779040
04131 Membrane trafficking [BR:
ogl04131
]
127779040
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127779040
Membrane trafficking [BR:
ogl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127779040
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127779040
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127779040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
127779040
NCBI-ProteinID:
XP_052161677
LinkDB
All DBs
Position
7:complement(7919058..7921416)
Genome browser
AA seq
314 aa
AA seq
DB search
MSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKISSIGGKSAPSQLLATLSGHYGPV
WRVAWAHPKYGTILASCSYDGRVIIWKEGAGGHWSQAHVFTDHKSSVNSIAWAPYEVGLC
LACGSSDGTISVMTMRADGGWDTARIERAHPVGVTAISWAPATALGSLAGSGELVYKLVS
GGFDSVVKVWGFVNGGWKLESALPSDVHTDCVRDVAWAPVLGLAKATIASASQDGKVIIW
SRGKVGDKWEGKVMHDFGSPVWRVSWSLTGNILSVAAGENNITLWKQASDGQWEEVMKVE
PTKPESSEEVKAEQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaagaaaatagagttggaccacaaggacatggtccatgattcagctatcgac
tactatggcaagcgccttgcaactgcctcctcagactccactgtcaagatctccagcata
ggcggcaaatctgccccatcccagctccttgcaacactcagcgggcactatggccctgtg
tggcgtgtcgcatgggcccatcctaagtatggtactatcctcgcatcctgcagctatgat
gggcgtgtgatcatttggaaggagggtgctggaggccactggtctcaagcccatgtattt
actgaccacaagtcctctgtcaactccattgcttgggccccatatgaggttggtctttgt
ctcgcctgtgggtcttctgatggaaccatttctgtcatgactatgcgagctgatggggga
tgggacactgcaaggattgagcgagctcaccctgttggtgtgacagcaatctcctgggct
ccagcaacagcacttggttctctggctggttcaggagagcttgtttataagcttgtctct
ggtggttttgactcagttgttaaggtctggggatttgtcaatggtggctggaaactggag
agtgctcttccttcagatgttcacacagactgtgtgagagatgttgcatgggcaccagtg
ttgggcttagctaaggcgaccatcgccagcgcttctcaagatgggaaggttatcatttgg
agtagagggaaagttggtgataagtgggagggaaaggtcatgcacgactttgggtcccct
gtttggagggtttcctggtccttgactggaaacatattatctgtagctgctggtgagaac
aacataactctgtggaagcaagcatcagatgggcaatgggaagaggtgatgaaggttgag
ccaacaaaacccgagtcatcggaagaggtgaaggctgagcagtag
DBGET
integrated database retrieval system
