Oryza glaberrima (African rice): 127779048
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Entry
127779048 CDS
T08853
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127779048
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127779048
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127779048
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127779048
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127779048
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127779048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
ubiquitin
pP_pnuc_2
Malt_amylase_C
SASP
Motif
Other DBs
NCBI-GeneID:
127779048
NCBI-ProteinID:
XP_052161685
LinkDB
All DBs
Position
7:3546573..3558201
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AA seq
1119 aa
AA seq
DB search
MTTSPPPPPPAEQQQQQEEEEVLVPRQELPNGTQPMEVVPSEPAATVENQQIEDPPISRF
TWTIENLSRVSTKKLYSEIFVVGGYKWRILIFPRGNNVEYLSMYLDVADSAVLPYGWTRY
AQFSLSVVNQMHNKFTIRKETQHQFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEA
EVAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDMKSTRKESFYDLQLDVKGCQDVYASFDKYVEVE
RLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPIQL
DLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVT
KEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLTTQIGKDIYFDLVDHDKVPS
FRIQKQMPFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQLKE
AANKAHNAELKLFLEVELGLDLKPLPLPDKTREDILLFFKLYDPEKEQLRYVGRLFVKAS
GKPQDILPKLRKMAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIVCFQK
SPKPDTADQYRYPDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKAFTYDEVVEKVAQ
KLGVDDPTKIRLTSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLPE
LQALKTLKVTYHHGTKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFYH
KIYKIFAPNEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFG
EPFFMVIREDETLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDTVASRFQRN
MYGAWEQYLGLEHPDTAPRKTHNANQNRHSFERPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctcccccgccaccgccgcccgccgagcagcagcagcaacaggaggaagag
gaggtgctcgtgccgcgccaggagttgcccaacggaacgcagccaatggaagttgtgcct
tctgagccagccgccactgtggaaaaccagcagattgaagatccaccaatctctagattt
acttggaccattgagaacctatcaagagtgagcacaaagaaactctactctgaaattttt
gttgttgggggctacaagtggcggattttgattttcccaaggggaaataatgttgaatat
ctgtctatgtatttggatgtggctgattcagcagtcctgccttatgggtggactagatat
gcgcagttcagcctctctgtggtcaatcaaatgcacaacaagtttacaataagaaaagaa
acacaacatcaattctctgctcgagaaagtgattggggttttacttcctttatgcctttg
ggtgatctctacaaccccagtagaggctatcttgtaaatgatacttgtatagtggaggcc
gaagttgctgtatgtaaggtggttgattattggagctatgactctaaaaaggaaactggt
tatgttggtctgaaaaatcaaggtgctacttgctatatgaattctcttcttcagactctg
taccatattccatatttcagaaaggctgtttatcatatgcccacaactgagaatgacatg
ccttcgggaagcattccattagctctgcaaagtctcttttataagctgcagtataatgac
agcagtgtctctacaaaggaactcacaaaatcttttgggtgggacatgcacgattcattc
atgcaacatgatgtgcaagaactaaatagagttctttctgagaagttggaagataagatg
aagggaactgttgtggagggcacaatacaacaattatttgaagggcatcacatgaattat
atcgagtgtatcaatgtggatatgaaatcaactagaaaggaatccttctatgatcttcag
cttgatgtcaaaggttgtcaggatgtctatgcttcttttgataagtatgtagaggtggag
cgcctggaaggagataacaagtatcacgcagaacaatatggactgcaggatgcaaagaaa
ggtgttcttttcatcgacttccctcctgttttgcaacttcagctaaaacgctttgaatat
gatttcatgcgtgatacaatggtaaagataaatgaccgctatgagttcccgattcagttg
gatcttgatagagatgatggaaagtacctctctccagatgcagataggaatgtgcggaat
ctttacactcttcacagtgttctcgtccatagtgggggtgttcatggtgggcattactat
gctttcatacggcctactctttctgatcagtggtttaagtttgatgatgagcgtgtaaca
aaagaggatgcaaagagggcattggaagagcaatatggtggtgaggaggagctacctcag
actaatcctggtctaaacaatactcctttcaagttcactaaatattcaaacgcatacatg
cttgtgtacattcgcgaaagtgacaaggacaaaataatttgtaacgtggatgagaaggac
atagcagagcaccttcgaattagattagaaaaggatcgtgaggaaaaggagcgtcgaaag
aaggagaaagctgaggcccacctatatactatcattaaggttgcaagggatgatgacttg
accactcaaatagggaaggacatatattttgatcttgttgatcatgataaggtcccaagt
ttccgcatccagaagcagatgcctttcactcaattcaaggaggaggttgcaaaagagttt
ggtattcctacccaatttcaaagattttggctgtgggccaagcgacaaaaccatacatac
cggcctaaccgtccactgactcctcaagaagagacgcacacagttggacagctaaaagaa
gcggcaaataaggctcataacgcagaactaaaattgttcttggaggttgaacttggactg
gaccttaaacctcttcctctgcctgacaagaccagagaagatatattgcttttcttcaaa
ctctatgatcctgaaaaggaacaactgcggtatgttggtaggctctttgttaaggcttcg
ggaaaacctcaggacattctgccaaaactgaggaaaatggctggtttttcacaggatgag
gaaattgaactttatgaggaaatcaagtttgagcccaatgtaatgtgtgaatatattgac
aataggcttctatttcgagcttgccagcttgaagatggtgacatcgtttgttttcaaaaa
tctccaaagccagatactgctgaccaatatagataccctgatgtcccatcctttctggtg
tatatacggaaccggcaggtagtccattttcgttcattggagaagcccaaagaggatgat
ttttgtttagagatgtcgaaggctttcacgtatgatgaagtagtggaaaaggtggctcaa
aaacttggtgttgatgacccaactaaaattcggcttacatcgcataactgttattctcaa
caacctaaacctcaacctattaaatacagaggtgttgagcgtttgctggacatgctgatt
cactataaccagacttctgatattctttactatgaagtattggatataccactcccagaa
ttacaagctctgaagacattaaaagttacatatcatcatggcacaaaagatgaggtgtca
gttcacagtattaggttgccaaagaacagcactgtcggtgatgtgctaaatgatataaaa
tcgaaggttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcac
aagatatacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactgg
accctgcgtgcagaggaggttccggaggaagagaaaaatcttggtccttttgatcgcttg
attcatgtataccattttaccaaagacactcaaaatcagacgcaagttcagaactttgga
gaacctttctttatggttattcgtgaggatgaaaccctttcttctattaaagaacggata
cagaaaaaactaaaagttccagatgaggatttctcaaagtggaaatttgcctacatatca
cttggtcgcccagattattttgaggattcagacactgtagcttcaagatttcagcgaaac
atgtatggagcttgggagcaatatcttggactggagcatccagacacggctcctagaaag
acacacaacgctaatcagaaccgccattcatttgagagacctgtaaagatctataactag
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