Oryza glaberrima (African rice): 127779066
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Entry
127779066 CDS
T08853
Name
(RefSeq) transcription elongation factor SPT4 homolog 1-like
KO
K15171
transcription elongation factor SPT4
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127779066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127779066
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127779066
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127779066
RNA polymerase I system
127779066
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
127779066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
127779066
NCBI-ProteinID:
XP_052161711
LinkDB
All DBs
Position
7:complement(23038516..23041352)
Genome browser
AA seq
131 aa
AA seq
DB search
MRGGGGGGGGDGMMDDGPKYAQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPFLDME
RDHDNVVNCTTPNFTGIISVMDPGRSWAARWLRIGKFIPGCYTLAVAEELPEEYQSVCQD
NNVQYFPPKRV
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggcggcggcggcggtggcggcgacgggatgatggacgacgggcccaagtac
gcgcagataccgacgagcttcggccacgagctccgcgcgtgcctccgctgccgcctcgtc
aagacctacgaccagttcatggagcaaggctgcgagaactgccccttcctcgacatggaa
agggatcacgacaacgtcgtcaactgcaccacccccaacttcacaggaataatctccgtg
atggatcctggtaggagttgggctgctcgttggttgagaattgggaagttcatccctggg
tgctatacgctggctgtcgcggaggagcttccggaggagtaccaaagcgtttgccaagac
aacaatgtgcaatacttccctccgaagcgtgtctga
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