Oryza glaberrima (African rice): 127779114
Help
Entry
127779114 CDS
T08853
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127779114
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127779114
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
TK
AAA_27
AAA_22
Motif
Other DBs
NCBI-GeneID:
127779114
NCBI-ProteinID:
XP_052161768
LinkDB
All DBs
Position
7:16018800..16033768
Genome browser
AA seq
844 aa
AA seq
DB search
MGPGPSLGIKAELSPSSGASLLSSSSLRIPPSRSSARAEMEGDAAGAGAGDGGGGGGDRS
SIVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYHNTKTLLHFYDPMVAIVPPNKT
AADGMVGVSELVGKHLPTNKKITMARGCFDDTKGAVMVKNLSARDPSALGLDTYCKQYYL
CLAAASATIKWIESERGVIITNHSLSVTFNGSFDHMNIDSTSVQTLEIIDPLHTELWGTS
NKKKSLFQMLKTTKTTGGTRLLRANLLQPLKDIQTINTRLDCLDELMSNEELFFGLTQGL
RKFPKESDKVLCHFCFKPKKDTDEVLKPANGRKSRGLISDIIVLKTALDAIPFLSKVLRG
AKSFLLRNIYQTICENPKYASMRKRIGDVIDEDVVHSRAPFVTCTQQCFAIKAGIDGLLD
VARRSFCDTSEAIHNLANKYREDFKLPNLKIPYNNRLGFYFIVPQKDITERLPNKFIQVV
RHGKNVHCSSLELASLNARNKSAAAECFLRTELCLEGLINEIREDIGILTLLAEVLCLLD
MLVNSFAFTISTKPVDRYTRPEFTDDGPMAINAGRHPILESLHNDFVPNNLFLSEASNMV
LVMGPNMSGKSTYLQQICLIVILAQIGCYVPAQFASLRVVDRVFTRIGTGDNVENNSSTF
MTEMKETAFIMQNVSSKSLIVVDELGRATSSSDGLAIAWSCCEYLLSTKAYTVFATHMES
LSELATIYPNVKILHFEVDLRNDRLDFKFRLKDGVRKVPHYGLLLAKVAGLPSSVIDTAA
SITSRITEQEMVRKDDNCEQYRSLQMAYQVTQRLICLKQSNQGDDYIREALQNLKDSYAA
GRLT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaggcccaagcctgggtataaaagcagagctctcgccatcttctggcgcaagc
ctcctctcctcctcctcgcttcggattccaccgtcgcggagctcggcgcgggcggagatg
gagggcgacgccgccggagccggagctggagatggtggcggcggcggcggcgaccggtcg
agcatcgtgatcggtctcatcgagaaccgagccaaggaggttggtgttgctgcttttgat
ttgagatcagcctcactgcatctttctcagtatattgagaccagttgctcatatcacaat
acgaagacacttctgcatttctatgatcctatggttgcaatagtgcccccaaacaaaaca
gcagcagacggtatggttggagtttcagagctggttggtaaacatttgccaacaaataaa
aagataacaatggcacgtggctgctttgatgacacaaagggtgctgttatggtaaaaaat
ctttcagctagagacccatctgcactcggtttagatacttattgcaagcaatactatctt
tgtcttgctgctgcctctgcaacaattaagtggattgaatcagaaagaggtgtaattatc
actaatcactcattatcagttacattcaatgggtcatttgaccacatgaacattgactca
actagtgtacaaacattggaaattattgaccctcttcatactgaactgtggggaactagc
aacaaaaagaaaagtctctttcagatgttgaagactacaaagactacaggagggactaga
ctactgagagccaacttgttgcaaccgttaaaagacattcaaacaatcaatactcgtctg
gattgcttggatgagctaatgagtaatgaggaattattctttggcttgacacaaggtctt
cgtaagtttccaaaagaatcagataaagttctttgccacttctgcttcaaacccaaaaag
gatactgatgaagtgctaaagcctgccaatggtagaaagagccgagggctgatttctgac
attattgttctaaaaacagctctggatgccataccattcctctccaaggttctaaggggt
gcaaaaagtttccttcttcgcaacatttatcagactatatgtgaaaacccaaagtatgca
agcatgagaaagagaattggggatgtcattgatgaagatgttgttcattcaagggctcct
tttgtaacctgcactcaacaatgttttgctattaaggctggaattgatggactgcttgat
gttgctcgtagatctttctgtgataccagcgaagccatacataaccttgccaacaagtac
agggaggattttaagcttccaaatttgaagataccatataacaacagactaggattttat
tttattgtaccccagaaggacattactgaaaggctccctaataaatttatccaggtagtt
agacatgggaagaatgtccactgctcaagcttggagcttgcttcgctaaatgccaggaat
aagtctgctgctgctgagtgcttcttgcgcacggaactttgtttggaagggcttattaat
gagatcagagaagacattggtatattaacgttgcttgccgaagtattatgcctgttggac
atgcttgtaaattcttttgcgtttacaatatctactaagcccgttgatcgttacacgaga
cctgaattcactgatgatggtccgatggcaattaatgctggaaggcatcctattcttgag
agcttgcataatgattttgttcctaacaatctctttctgtctgaagcatctaatatggtt
cttgtcatggggccaaacatgagtgggaagagcacatatcttcaacagatttgtctaata
gtcattcttgcacaaattggctgttatgttccagctcaatttgcatcactaagagtggtt
gatcgcgtattcacacggattggcactggggacaatgttgaaaataactcaagcacattc
atgacagaaatgaaagagacagctttcattatgcagaatgtttcttcgaagagcctgatt
gttgtggatgagcttggaagagctacgtcttcctctgatgggttggcaattgcatggagc
tgctgtgaatatctattatctaccaaagcctacacggtgtttgccacgcacatggagagc
ttgtcagaacttgcaaccatctatccaaacgtgaagatcctccattttgaagtcgacctg
agaaacgaccgcctcgatttcaagttccggttgaaggatggtgtccggaaagtaccacac
tatggtcttttgctggcaaaggtggctggtctcccttcttcagtgatcgacactgcagca
agcatcacttcacggatcacagaacaggaaatggtgaggaaggacgacaactgcgagcag
taccggtcgctccagatggcgtaccaggtcacgcaacggctcatctgcttgaagcaatcc
aaccaaggcgatgactacatccgggaagcgttgcagaatctcaaggacagctatgctgca
ggccgcttgacatga
DBGET
integrated database retrieval system
