KEGG   Oryza glaberrima (African rice): 127779405
Entry
127779405         CDS       T08853                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127779405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127779405
   03041 Spliceosome [BR:ogl03041]
    127779405
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127779405
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127779405
Spliceosome [BR:ogl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127779405
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 127779405
NCBI-ProteinID: XP_052162129
LinkDB
Position
1:complement(22176420..22179343)
AA seq 447 aa
MDPYPKKRKPDENGAAVASSPAAGAAALGLTRDDLLRLVEPLSRDQLADIAATAALASGV
ALDAVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDLEEAVVITDKSTGRSKGYG
FVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGASGGAAGAGGAPAADVSLRKIF
VGNVPADMPSERLLAHFAAYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVK
VIDGHQLVCKLAIEGKKGKQSQQQQQQSGPGGAQPPQMLQGGPPDMPGSGLGLGGPQMGA
QYGGPGSLSSYGAFGGVGAGLGGPNPYANLPSSMGGGGAGLGSLGNQMPSGMGGAGAGAY
GPGGLGGGSFGGSSQFGAGGMGAYGGLGMGGASSLYRMQQGSGGLPSGGYGEGNYPLPGP
GFRGQEGGMSPGPGGRAPMYPNMPPYF
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggatccctaccccaagaagcgcaagcccgacgagaacggcgcggccgtggcctcctcc
ccggccgcgggcgccgccgcgctcggcctcacccgcgacgacctcctccgcctcgtcgag
ccgctctcccgggaccagctcgccgacatcgccgccaccgccgcgctcgcctcgggggtg
gccctcgacgccgtgcgcgccgccgccgaccgggacccggccctccgcaagctcttcgtg
cgggggctcggctgggagaccaactccgactcgctccgggccatcttctccgccttcggc
gacctcgaggaggccgtcgtcatcaccgacaagtccaccggccgctccaagggctacggg
ttcgtcacgttccgccacgccgactccgccgtcctcgccctcaaggagccctcgaagaag
atcgacggccgcatgaccgtcacgcagctcgccgccgccggcgcggccgggggggcgtcg
ggcggggccgccggcgccggtggcgcccccgcggccgacgtctccctccgcaagatcttc
gtcgggaacgtccccgccgacatgccgtcggagcgcctccttgcgcatttcgcagcctat
ggtgagattgaggaggggcctctagggttcgacaagcagacgggcaagttccggggcttt
gccctctttgtgtacaagacacccgagggtgcgcaggcctcgttagtggactcggtgaag
gtgattgacgggcaccagcttgtctgcaagctagcgatcgaagggaaaaaggggaagcaa
tcgcagcagcagcagcagcaatctggacctggtggggctcagccgccccaaatgctccaa
ggcgggccgccggacatgccgggttcagggcttgggcttggtggaccacaaatgggtgcg
cagtatggtggccctgggagtctgtcttcgtatggtgcatttgggggtgtaggcgctggg
ctaggtggtcccaatccgtatgcgaatttgccatcttccatgggtggcggcggagctggg
ttgggttcattgggcaatcagatgccttctgggatgggtggtgctggggctggtgcgtac
gggcctgggggattgggtggtggttcatttgggggctcatcccagtttggtgctggtggg
atgggggcttatgggggtctaggcatgggtggagcctcatcactgtaccgcatgcaacag
ggttcgggtgggcttccttctggcgggtatggtgagggtaattaccctcttccagggcct
ggtttccggggtcaggagggtggaatgtcacctggaccaggtggtagagctcctatgtac
cccaatatgcctccttatttctga

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