Oryza glaberrima (African rice): 127779468
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Entry
127779468 CDS
T08853
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127779468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127779468
Spliceosome [BR:
ogl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127779468
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
127779468
NCBI-ProteinID:
XP_052162208
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Position
7:2304241..2309671
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AA seq
484 aa
AA seq
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MASLADSFLADLDELSDNEAYPEEENAEAVGMDEDGGEDMLDLESLNYDDLDSVSKLQKT
QCYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPL
SEENLAKTIEACERALTLDAAKKKVLDFVESRMGHIAPNLSAIVGSAVASKLMGTAGGLG
ALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTRACRLIAAKS
TLAARINSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAQTDMMKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQSHGNLLGSGTQSTYFSETGTFSK
IKRN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgctgattctttcttagcagatcttgatgaactgtcagacaatgaagcc
tatcctgaagaagaaaatgctgaggcagtgggtatggatgaggatggcggtgaagatatg
cttgaccttgagtctcttaattatgatgatcttgacagtgtctcaaagctgcagaagaca
cagtgttataatgacataatgcagaaagttgaggatgcacttcagaaaggcacagacttc
tccaatcaagggtccatcttggaggaggatccagaataccagcttattgttgattgcaat
gctttgtcagtagatattgagaatgaaatcattataatacataatttcatacgcgacaag
tatagactgaagtttcctgaactggaatcccttgttcatcatcctattgactatgcccgt
gttgttcagaagattggaaatgagattgatttgacactcgtagacctggaagggctttta
ccttctgcaattataatggttgtgtcagtgacagcatcaacaactaacgggaagcctctt
tctgaggagaatctggcaaaaaccattgaagcatgtgagagagcccttactcttgatgct
gcaaagaagaaggtgcttgattttgtcgagagcagaatgggtcacattgcaccaaacctt
tctgctattgttggcagcgctgttgcctcaaaactgatgggaactgctggtggtttggga
gcacttgcaaaaatgcctgcttgcaatgttcagttacttggggcaaagaagaagaatctt
gctggattttctagtgccacatctcagtttcgtgttggctatcttgaacaaactgaagta
tttcagagcacacctccagctctgagaactcgtgcttgcagacttatagctgcaaaatca
actctagccgcaagaatcaattcaatcagaggtgatccaactggaaaagctggccggaac
ttgttagaagaaattcgtaagaagattgagaagtggcaagaaccgcctcctgcaaagctt
ccaaaaccacttcctgttccagactctgagcctaaaaagaagagaggaggccgtcggctt
cggaaaatgaaagaaagatatgcgcagactgacatgatgaagcttgcgaaccgaatgcag
tttggggtaccagaagaaagctcattaggtgatggcttgggggaaggctatggcatgctt
ggacaggcaggaagcgggaaactacgtgtatcagctgcgcaaagcaaacttgctgctaaa
gtggccaaaaaattcaaggagaagagctatggtagcagtggtgcaacatctggactgacg
tctagtttggcctttacaccagttcagggaatagaactatcaaatccccagtcccatggg
aacctgctaggcagtggaacacaaagcacttacttttctgagactggaacattttcaaag
atcaagaggaactga
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