Oryza glaberrima (African rice): 127779572
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Entry
127779572 CDS
T08853
Name
(RefSeq) probable V-type proton ATPase subunit H
KO
K02144
V-type H+-transporting ATPase subunit H
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00190
Oxidative phosphorylation
ogl01100
Metabolic pathways
ogl04142
Lysosome
ogl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
127779572
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127779572
04142 Lysosome
127779572
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Gene cluster
GFIT
Motif
Pfam:
V-ATPase_H_N
V-ATPase_H_C
HEAT
ARM_ARMC5
CTNNBL
Rcd1
Uso1_p115_head
TOR1L1_N
ARM_LIN_2nd
Adaptin_N
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
127779572
NCBI-ProteinID:
XP_052162343
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Position
7:19454178..19459938
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AA seq
452 aa
AA seq
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MDHAELTTEQVLKRDIPWESYMANKLISGTCLQLLRRYDHKPESQRGPLLDEDGPSYVRV
FLNILRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLSGEDIYDPFLRLLLKGNWFV
QEKSCKILTQIISARPKMQNGIVPNGEASNSKSKLTSTQDVLRGLVDWLCSQLRNPTHPN
CSVPTAMHCLATLLREQYVRALFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLSF
YDAAVDYLSTTRVMPRLVEVVKGSTKEKVVRVVIMSIRNLLAKGAFAAQMIDLGLPHIVQ
NLKAQAWTDEDLLDALNQLEIGLKDNLKKLSSFEKYKQQVLLGHLDWSPMHKDPSFWREN
INNFEENDFQILRVLMTIIDTSADTTALAVACYDLSQFLQYHPSGRIVVADLKAKDRVMK
LMNHENAEVRKNALLCVQRLFLGAKYASFLQT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatca
tacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgaccac
aaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagtg
ttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctg
attgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctctc
tctggtgaagacatctacgaccctttcctaagattgctcttgaaaggtaactggtttgtg
caagaaaaaagttgtaagatattgacccaaataataagtgcacgacccaagatgcagaat
ggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaagat
gtgttaagaggtttggttgattggctctgttctcagctgaggaatcctacccacccaaac
tgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttaga
gctttatttgttcaggcggatggtgtgaaactgctcattcctttaatttctccagcttcc
acacaacagtcgatccagcttctctacgaaacttgcctctgcatctggcttttatccttt
tatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggtt
gtgaaaggttcaacaaaagagaaggttgtcagggtcgttatcatgtctatccgtaacttg
cttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtacag
aatttgaaagctcaagcatggactgatgaggatttattagatgcgctgaatcagctagaa
ataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaagtt
cttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgagaac
attaataattttgaagaaaatgatttccagattctacgtgtgcttatgacaatcatcgac
acatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttcag
taccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagtgatgaag
ctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggctt
ttccttggtgcgaagtacgcgagcttcctgcagacctaa
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