Oryza glaberrima (African rice): 127779618
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Entry
127779618 CDS
T08853
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127779618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127779618
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127779618
Enzymes [BR:
ogl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
127779618
Ubiquitin system [BR:
ogl04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
127779618
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127779618
Exosomal proteins of other body fluids (saliva and urine)
127779618
Exosomal proteins of colorectal cancer cells
127779618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Motif
Other DBs
NCBI-GeneID:
127779618
NCBI-ProteinID:
XP_052162404
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Position
7:26405126..26409987
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AA seq
1058 aa
AA seq
DB search
MRCLRFLRRGLLSMLPTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQL
AVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSVTLHDVKNVEMWDLSANFFLS
ENDIGKNRAAACVSKLQELNNAVLISALTEELTTDHLSKFQAVVFTDIGLDKAYEFDDYC
HSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGEDPHTGIIASISNDNPVLVSCVDD
ERLEFQDGDFVVFSEVHGMAELNDGKPRKVKNARPFSFCIEEDTTKYDMYIKGGIVTQIK
EPKILRFKSLRDAMRDPGDFLLSDFSKFERSPVLHLAFQALDKFKKEYGRYPAPGCERDA
QSFLKCAADINEALTDHKLDTIDEKLFRHFASGSRAVLNPMAAMFGGIVGQEVVKACSGK
FHPLYQFFYFDSVESLPTYPLDSEDIKPSNSRYDAQISVFGSKLQKKLEEANTFVVGSGA
LGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIRQAKSTVAAAAASA
INPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMDMRCLYFQKALLES
GTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEK
TPGEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLGKERCSLFEDCIRWARLKFEDY
FSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLQFSVSDPSHIHFIMSASILRAESFG
IAIPDWAKNTSKLADAVSEVAVPQFEPKKGVSIVTDEKATSLSSASVDDASVIDDLLAKL
EECAKRLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPEVDKLKAKFIAGRII
PAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPPKVMKHQDMS
WTVWDRWSIKGNLTVAELLQWFSDKGLTAYSISCGTSLLYNNMFARHKERLNKKVVDVAR
EVAKVDVPEYRKHLDLVAACEDDDGNDIDIPLVSVYFR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacggtttctgcgcaggggcttgctctccatgcttcccaccaacaagaga
gccgccggcacggacgacgaccgccccaccgaccccaagagacccaaggtcgcccaaaac
gggagcacgaatggagtggtggtgccggagattgacgaggacctgcacagcaggcagctc
gccgtctacgggagggagaccatgcgccgcctcttcgcctcccatgtcctcgtctctggc
ctcaatggcctcggtgcagagattgccaagaaccttgctcttgctggggtcaagtccgtc
accctacatgatgtgaaaaacgttgagatgtgggatttgtctgccaatttctttttatct
gaaaatgatattggcaaaaacagggctgctgcttgtgtatccaagctgcaagagctcaac
aatgctgttcttatctctgctctaacagaggaactgaccacagaccacctgtctaaattc
caggctgttgttttcaccgatataggtttagacaaggcctacgaatttgatgactactgt
cacagccactgccctcctatttccttcatcaaagctgaagtttgtggtctctttggtact
gtcttttgtgactttggaccagagtttaccgttcttgatgttgatggtgaagacccacat
actggtataattgcatccatcagcaatgacaaccctgtgttggtgtcctgtgttgatgat
gaacggcttgagtttcaggacggtgattttgtggttttctctgaggtccatggtatggct
gagttaaatgatggaaaaccaaggaaggttaaaaatgcaaggccattttcattttgcatt
gaggaagatacaactaaatatgacatgtatataaaaggtggaatcgttacacagatcaag
gagccaaagatactacgattcaagtcactaagagatgctatgagagatcctggagatttc
cttctgagtgacttctctaagtttgaacgttcccccgtgcttcacctagcatttcaagct
ctggataagtttaagaaagaatatggacgctaccctgctcctggttgtgagcgggatgct
caaagtttccttaagtgtgctgctgatattaacgaagccttaactgatcacaagctggat
acaattgatgagaagttattcagacatttcgcaagtggttctcgagctgttttgaaccct
atggctgcaatgtttggtggtattgttggtcaagaagttgtgaaggcatgttcaggaaaa
ttccatcctctctaccagttcttctactttgattctgtcgaatccctgccaacgtatcca
cttgactctgaagacatcaaaccgtcaaacagccgctatgatgctcagatctctgtattt
ggttccaaacttcagaagaaactggaagaggcaaatacttttgttgtggggtctggtgcc
cttggatgtgaatttttgaagaaccttgctttaatgggagtgtcttgcagccctaaggga
aagctaactataacagatgatgatgtcattgagaaaagtaatttaagccgccaatttctg
ttccgtgactggaatatcaggcaggcaaagtctactgtggccgctgcagctgccagtgct
atcaaccccaacctctgtattgatgctctccagaaccgtgcttgtccagatacagagaat
gtgttccatgacacgttctgggagggtttagatgttgtcatcaatgcgcttgataatgtt
aatgccaggatgtatatggacatgagatgcctgtacttccagaaggcattgttggagtca
ggaacattgggtgcaaagtgcaatacgcaaatggtgattcctcaccttactgaaaattat
ggggcttcaagagatcctccagagaagcaggcaccaatgtgcacagtccattcttttccg
cacaatattgatcattgcttgacttgggcacgctctgagtttgagggtttgctagagaag
acaccaggtgaagtaaattcatttctctctaatccggctcaatatgctgctgccatgagg
aaggcaggtgatgcccaagctagagaattgctcgagcgtgtttctgaatgtcttggcaaa
gagcgttgcagtttgtttgaggattgcataagatgggccagactgaaatttgaggactat
ttctcaaaccgtgtgaagcagctcacatttacctttcctgaagatgctgccactagtacg
ggtgctcctttctggtctgcccccaagcgcttccctcgcccactgcaattttcagtctct
gatccctcccacattcactttattatgtctgcttcaatactgagagctgagtcatttgga
attgctataccggactgggcaaagaacacaagtaagctggctgatgcagtaagtgaagtt
gccgttcctcaatttgagccaaagaaaggggtcagtattgtgacagatgagaaagctact
agcctttccagtgcctcagttgatgatgctagtgttattgatgaccttcttgctaagttg
gaagaatgtgccaagaggttacctccaggattccaaatgaaacctatccaatttgagaag
gatgatgacaccaactttcacatggatctgatctctggatttgcaaatatgcgcgcaagg
aactacagcattccagaggttgacaaattgaaggctaagttcattgctggaagaatcatc
ccagctattgcaacttcaacagcgatggcgacaggactggtctgtcttgagctatacaag
gttattgctggcgagcaccccattgaagactaccgcaatacatttgcgaacctggcactg
ccactattctcaatggctgaacctgttccacccaaggtgatgaagcatcaagacatgagc
tggactgtatgggacagatggtccatcaagggcaatctgactgttgctgagctcctgcaa
tggttcagcgacaagggccttaccgcttacagcatttcctgtggcacttcgctgctgtac
aacaacatgttcgcaagacacaaggagagattgaacaagaaggtggtagacgtggccaga
gaagtcgccaaggtggatgttcctgaatacaggaagcatttggatcttgtggcggcctgc
gaggatgatgatggaaacgacatcgatattcctcttgtctcagtttacttccgatag
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integrated database retrieval system
