Oryza glaberrima (African rice): 127779694
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Entry
127779694 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127779694
KO
K08518
syntaxin-binding protein 5
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127779694
Membrane trafficking [BR:
ogl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127779694
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127779694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
127779694
NCBI-ProteinID:
XP_052162522
UniProt:
I1QDI4
LinkDB
All DBs
Position
7:26448712..26457127
Genome browser
AA seq
1101 aa
AA seq
DB search
MKRLLHKALHQGEGGTHVDVAQMDAQIALHYGIPYTASLLAFDPVQRLLALATLDGRIKI
FGGDNIEGLLISPNSLPYKFLQFIQNQGFLIAISNENEIQVWNLEFRQLFYSSKWNINIT
AFAVVEGTFLMYLGDENGLLSVLKYDVDDGKLQKMPYNVPIHSLAEAACVSLEDPQSIVG
ILPQPDTFGTRVLIAYEKGLLVLWDVSEDRAISVRGYGDLHMKNQITGAQRDAGEDEDNN
ISTEEEREICSLCWASQGGSTVAVGYITGDILLWDMTARSSKQDNRSDEPSNVVKLQLAS
GSRRLPVIVLHWSSGSADSNKGGHLFVYGGDDMGSEEVLTVLSLESTTGLESTRCMSRMD
LRLDGSFADMILISDSGFPYKSRTSAVFILTNPGQLNFYDGGALFSVPKTEEGKAQIEAQ
KFPVTVPTTDPNITVTNLYSLNGRESQSIPLKKFVVKQNAAPFMQRNMKWPLTGGVPSEM
SMNGNYTVERIYIAGYQDSSVRIWDATFPVLTPMFVLDGKVVGVNMDGENSAVSSLAFCS
LNMTLAVGTTSGLIRIYKLREHTGGSSFHFVSESKQEVHVVQHGRGFHCHVAFLASNSPV
RSLRFTASGEVLAVGYQNGQLASFNANQLSIMFTVDCASGTNSPVVSLSNYNVVTSAAKA
NEQQKESLQSAKSPANVLLSLTKDGHFTVHDSMNGLTINSCVLDQKQLSAISMYVIDGTS
EEEQNQLSEDKFPSQGHIAKEESVLDKKQTHTVDKSQKNTRQPSHSGGSDSFLLVCCEDL
VLLFSLPSLIQGSNKPLHRIKLAKHCCWSAVLTNIDGKACGFILVYQTGAIELRSLPELA
ILAESSLMSLSRWSYKAGMEKSMSSANGQIALVNGSELAIISLIASENAFRLPESMPCLH
DKVLAAAAEAAINASMDQKRNQTPAGGILGGIIKGLKGKEENAKQKGSLSAQTMSEQLES
IFLKESLVEPSIPDPDDPIEELSIDDIDIDDEIPLAPPPASSTSHVNKKTTAEEERAKLF
EGSSNVEKPRMRTHQEILTKYKFGGDAAAAAAHAKDKLMQRQEKLERISQRTAELESGAE
NFASLAQELAKSMENKKWWKL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcctcctccacaaggctcttcatcagggagagggaggaactcatgtagatgtg
gcacagatggacgcgcagatcgcccttcactacggcatcccgtacaccgcatcgctcctc
gcctttgaccccgtccagcgcctcctcgccctcgccacactggacggtaggattaaaatc
tttggaggtgataacatcgagggcctccttatatcacccaacagtctcccatacaagttt
ttgcagtttatacagaaccaggggtttctgattgccatttctaatgagaatgaaatccag
gtatggaatcttgagttcagacaactattttattcttcgaagtggaacatcaatataact
gcttttgcagttgtagaggggacatttctgatgtaccttggagatgagaatggcctgctt
tcagtactgaagtatgacgttgatgatgggaaacttcaaaagatgccctacaatgttccg
atacattccttagctgaagcagcttgcgtttccttagaggatcctcaatctattgttgga
atactgccgcagcctgatacctttgggaccagggtgctgattgcatatgagaaaggacta
ttagttctttgggatgtatcagaggatcgtgctatttcggttagaggctatggtgatttg
cacatgaagaatcaaatcacaggtgcacagcgggatgctggtgaagatgaagacaataat
atcagcacagaagaagagagagaaatttgctccctttgttgggcatcgcaaggaggttca
actgttgctgttggttatataactggagacattcttctgtgggatatgactgcaagatcc
tctaaacaagacaatagaagtgatgaaccatctaatgttgttaaacttcagctggcttct
ggtagtcgtaggcttcctgttattgtattacactggtcttctggttctgctgattctaac
aaaggagggcatctctttgtatatggtggtgatgatatgggttccgaggaagttctgacg
gttctaagcctggaatcaactactggattagagtcaacaagatgtatgtcacgaatggat
ctcagacttgatgggtcctttgctgatatgattttaatttcagatagcgggtttccgtat
aaaagccgaacatctgcagttttcattttgacaaatcctgggcaattgaatttttatgat
ggtggtgctctattttctgttccaaaaacagaagagggaaaagctcagattgaagcacaa
aaatttccagtcacagttccaacaactgatcccaacataacagtcactaatctttattca
ctaaatggaagggaatctcaaagtattccacttaagaaatttgttgttaagcaaaatgcc
gcacctttcatgcaacggaacatgaaatggcctttgactggtggagttcctagtgaaatg
tcaatgaacgggaattacaccgtggaaagaatatacattgcagggtatcaagatagttct
gtgagaatatgggatgcaacctttccagttctgacgccaatgtttgtcttggatggaaag
gtggttggtgtaaatatggatggagaaaattccgctgtatcatcacttgctttttgctca
ttaaacatgacattggctgttggcacaacaagtggtctgattcgcatctataagcttcgt
gaacacactggaggttcaagctttcattttgtgagtgaatctaagcaggaagttcatgtt
gttcaacatgggagaggatttcattgtcatgttgcctttctggcctcaaattcccctgtg
aggtctctcagatttacagcttcgggggaggtccttgcagtgggatatcaaaacggtcag
ctggcaagttttaatgccaatcaactttcaattatgttcactgtggactgtgcatcagga
acaaattctcctgttgtttcattgagcaattacaatgtggttacatctgccgcaaaggca
aacgagcaacaaaaggagagtcttcaaagtgcaaagtcccctgcaaatgttctactttcc
ttgactaaggatggacattttactgtacatgacagcatgaatggtctgacaataaattca
tgtgtgttagatcagaagcagctatccgcaatttccatgtatgtcatagatggaacgtca
gaggaggaacagaaccaattatcagaagacaaattcccaagtcaaggtcatattgcaaaa
gaggaaagtgttctggacaaaaaacaaacacacacagttgataagagccagaaaaatact
cggcaaccttcgcacagtggtggttcagattcatttcttttggtttgctgtgaggacctg
gttcttttattttctctgccatcgctgattcagggaagtaacaagcctctacataggatc
aaacttgcgaagcactgctgctggtcagcagttctcacaaatatagatggtaaagcttgc
ggatttatattagtttatcaaacgggcgcaatagaactgagatctctgccagagctggct
attcttgctgaaagctccttaatgtcgttatcaaggtggagttacaaggcaggcatggag
aaatctatgagctccgcaaatggacagattgctctggtaaacgggtctgaacttgcaatc
atctctcttatagcctcagagaatgccttcaggcttccagagtcaatgccatgccttcat
gacaaagtacttgcagcagctgctgaagcagctattaatgcctcaatggaccagaaaaga
aaccagactccagcaggaggaattcttggtggcatcattaaaggattgaaaggcaaagaa
gaaaatgcaaaacagaaaggaagtttaagtgcacaaaccatgagcgaacagttggaatca
attttcttgaaagaatcacttgttgaaccatcaatacccgatcctgatgaccccatagaa
gaactgtcaatagacgacatagatatcgatgatgaaattccactagcacccccaccagca
tcatctacatctcatgtgaataaaaaaacaacagctgaggaggagagagcaaagctattt
gaaggatcaagcaatgttgaaaagccaagaatgagaactcaccaagaaattctcaccaaa
tataagtttggcggggatgcggcggcggcggctgctcatgcaaaagataagctcatgcag
cgacaggagaaactagagagaataagccaacgaaccgcggagcttgagagtggagcagag
aattttgcttccctggcccaggagcttgcgaaatcaatggagaacaagaaatggtggaag
ctataa
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