Oryza glaberrima (African rice): 127779846
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Entry
127779846 CDS
T08853
Name
(RefSeq) myosin-1 isoform X1
KO
K10357
myosin V
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127779846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127779846
04131 Membrane trafficking [BR:
ogl04131
]
127779846
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127779846
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogl04812
]
127779846
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127779846
mRNA cycle factors
P-body specific factors
127779846
Membrane trafficking [BR:
ogl04131
]
Others
Actin-binding proteins
Myosins
127779846
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127779846
Cytoskeleton proteins [BR:
ogl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127779846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
MAD
Myosin_N
AAA_16
Nuf2_DHR10-like
Zeta_toxin
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
127779846
NCBI-ProteinID:
XP_052162724
LinkDB
All DBs
Position
7:complement(20089254..20098868)
Genome browser
AA seq
1252 aa
AA seq
DB search
MLSAAAVMAPAPAAAKSSLEVLLETIKKRDEQPKDAPPALPARPTCRGRLPSARRPSLPS
GVKLENGAAKGAVADTVMAGVKLENGAAKGAVADMVMADKKPGVEMKICVQEAKEENVVK
TRIFGAKRKFSNGEVLEESPYADNIHKERKEMMVSKELPSVSPRTKTNGKPVFTDTMDYV
LQKKLRVWCSSPDATWKLGQIQSVSGDDVEILMVNGEVLTLSPDRLLPANPDILDGVDNL
IHLSYLNEPSVLYDLQSRYSRDLIYTKAGPVLVAVNPLKEVALYGKDFISQYRKKLNDDP
HVYAIADLAFNEMRRDGVNQSIIISGESGAGKTETAKIAMQYLATLGDARGMESEVLQTN
AILEALGNAKTSRNDNSSRFGKLTEIHFSETGKLSGAKIQTFLLEKSRVVRRATGERSFH
IFYQLCSGANPLLKKKLFLKEADYYNYLKQSACLRIDGVDDAKRFSMLVDALDIIQISKE
DQMKLFSMLAAVLWLGNISFTVIDNENHVDIVSNEGLATAAKLLGCSAPQLMNALTTRKI
QAGKDNIIQKLTLTQAIDARDALAKSIYAHLFDWVVEQINHSLGTGREHTWRSISILDIY
GFESFIKNGFEQFCINYANERLQQHFNRHLFKLEQEEYLEDGIDWANVEFVDNADCLTLF
EKKPLGLLSLLDEESTFPKATDFSFANKLKQHLRGNSAFRGEQEGAFKICHYAGEVTYDT
TGFLEKNRDPLNSELIQLLSSCKSELPKYFASVMVADSQNKSTLSWHSAVDSQKQSVVTK
FKAQLFKLMQQLENTTPHFIRCIQPNSKQRPMLFEHDLVSHQLKCCGVLEVVRISRAGYP
TRMTHQQFAERYGCLLLRSIASQDPLSISVAVLQQFNIPPEMYQVGYTKLFLRTGQVAAL
ENAKNRMLHGALRIQKNFRGLCTRQEYQGLKKGAMTLQSFIRGEKARVHFDHLVKRWKAS
VLIQKYARRRIAATMFIDQLKYVVLLQSVMRGCLARKKYKCLKEEKDSKASHRKVIHVRN
NVSQARMYHETNGDYPRQPVITELQGRVSKAEAALRDKEEENEMLKQQLDQYEKKWSEYE
AKMKSMEEAWKKQLSSLQLSLVAAKKSLTAEDVASRAARTDAAPMHAHYDSEDTSTGTHT
PEGTEFKYQNHNSEARVAAPNSDRRINAVNHLAKEFEDRRQVFEDDAGFLVAVKSGQVGS
NMNPDDELRKLKDRFATWKKDYKSRLKETKVNLQKVGEEKSRKRWWGKKSSK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgcagccgccgtgatggcgccagccccggccgcggcgaagagctccctggag
gtcttgctggagacgataaagaagcgcgatgagcagcccaaggatgcgcctccggcattg
ccagcgcggccgacgtgccgcggccgcttgcccagtgcaagacggccatcactgccttct
ggggttaagctcgagaatggcgcggcaaaaggcgctgtggcggatacggtgatggctggg
gttaagcttgagaatggcgcggcaaaaggcgctgtggcggatatggtgatggctgacaag
aagccaggggttgagatgaagatttgtgttcaggaggccaaggaggagaatgtggtaaaa
actcgcatatttggggccaagaggaagttctctaatggggaggttcttgaggagtcaccg
tatgctgataacattcacaaggaaaggaaggagatgatggtctctaaggagctcccttct
gtttctccaaggacaaagacaaatgggaagccggtgttcactgataccatggattatgtc
ctccagaagaagctccgagtttggtgttcttcaccagatgcaacatggaaacttggacag
attcaatcagtttctggagatgatgttgaaatactcatggttaatggagaggttttgaca
ctgtcaccagacagactcttgccggcgaaccctgatattcttgatggagtggataattta
atccatctcagctatttaaatgaaccctcagttctttacgatctgcagtccagatattct
cgtgatcttatttatacaaaagcagggcctgttctggttgctgttaatccattaaaagaa
gttgctctctatgggaaagatttcatctcgcaatacaggaaaaaactcaatgatgatcca
catgtgtatgcaatagctgacttggcttttaatgaaatgcgaagagatggcgtaaaccaa
tctataataataagtggcgaaagtggagcaggaaagactgagacagctaaaattgcaatg
caatatttggccactctaggggatgccagaggaatggagtctgaggttcttcagacaaat
gctattctggaagcattagggaatgcaaaaacatcaagaaatgataactctagtcgattt
ggtaaacttaccgaaatacacttctctgaaactggaaagctgtctggtgctaaaattcaa
acattcctgttagagaagtcgagggtggttcgaagagcaacaggggagaggtcattccat
attttctatcaactgtgctctggagctaatccccttttaaagaaaaaactgtttttgaaa
gaagccgattactacaattacttaaagcagagtgcttgcttgagaattgatggtgttgat
gatgctaaaagattttcaatgctagtggatgcactcgatattattcaaatatctaaagaa
gaccaaatgaaattgttttccatgctcgcagctgtcttgtggcttggaaacatttcattc
actgtgatagacaatgaaaatcatgtggatattgtttcaaatgaagggttggctactgca
gccaagctgttaggttgcagcgctcctcaattgatgaatgccctcactacacgtaaaatc
caagctggaaaggacaatattattcaaaagctgacattaactcaggctattgatgcaagg
gatgctctagcaaagtccatttacgcccatttgtttgactgggttgttgagcaaattaac
cactcacttggaactggaagagaacacacatggagatccataagtattttagatatttat
gggttcgagtctttcattaagaatggttttgagcaattttgtataaactatgccaacgaa
aggctacaacagcacttcaatcgacatcttttcaagctagaacaggaggaatacttagag
gatggaattgactgggcaaatgtggaatttgtggataatgctgactgcttaactctcttt
gagaagaaacctctagggctattatcattactggatgaagagtctacattcccaaaggca
acagacttttcttttgctaacaagcttaagcagcacttgaggggaaactctgccttcagg
ggtgaacaagaaggtgcttttaagatttgccattatgctggagaggtgacgtatgataca
actggtttcttggagaagaacagagatccgttgaactctgagttaattcaactactctca
tcatgtaaatctgaactcccaaaatactttgcctctgtcatggttgctgattctcagaat
aaatcaaccttgtcatggcactcagctgttgattcacaaaagcaaagtgtcgtgaccaaa
tttaaggctcaactgttcaagctgatgcagcaattggagaacacaactcctcatttcatt
cgatgcatccagccaaatagcaaacaacgtcccatgctatttgagcatgatcttgtttca
caccagcttaagtgttgtggggtgctcgaagttgtgcggatatcaagagcaggctatcca
actaggatgactcaccaacagtttgctgaaagatatgggtgtcttctcctgcgttccatt
gcatcgcaggatcctcttagtatttcggttgctgtattacaacagttcaatattccacca
gaaatgtatcaagttggctatacaaaattgtttcttcgtacaggacaggttgctgcactg
gaaaatgctaagaatcggatgctccatggagcccttcggattcagaagaacttccgtggg
ttgtgtactagacaagaataccagggactgaagaaaggagcaatgactttgcaatcattt
ataagaggtgaaaaggcaagagttcactttgatcatcttgtaaagagatggaaggcatct
gttctcatacagaagtatgctaggcgtcgaattgcagctaccatgtttattgatcagctc
aaatatgttgttcttctacaatcagtgatgcgtgggtgcttggccaggaagaaatataag
tgcctgaaggaagagaaggactcaaaggctagtcacagaaaagttatacatgtaaggaat
aatgtttcacaagcgcggatgtatcatgaaacgaatggagattatcctcggcaaccagtt
atcacggaactccagggacgtgtttcaaaagctgaggctgcattgcgagataaggaggaa
gaaaacgaaatgctaaagcaacaattggatcaatatgagaagaaatggtcagaatatgag
gccaaaatgaaatctatggaagaggcatggaagaagcagctctcctctctgcagttgagc
cttgtggcagccaagaagagcctaactgcagaagatgtggccagccgagcagctcgaacc
gacgctgctccaatgcatgctcattatgattctgaagatacgtcgaccgggacccatacc
cctgaagggacagagttcaaatatcaaaaccacaactctgaggctagagtggcagcaccg
aattcagataggcggataaacgcggtgaaccacctagccaaggagtttgaggacaggcgg
caggtgttcgaagacgatgctggcttccttgttgccgtgaagtccggacaagttggttca
aacatgaacccagacgatgaactccgaaagctcaaggaccgattcgcgacatggaagaaa
gactacaagtctcggttgaaggagaccaaggtaaatcttcagaaggttggtgaggagaaa
tcccggaaaagatggtgggggaagaagagctcaaagtga
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