Oryza glaberrima (African rice): 127779937
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Entry
127779937 CDS
T08853
Name
(RefSeq) SKP1-like protein 5
KO
K03094
S-phase kinase-associated protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
ogl04120
Ubiquitin mediated proteolysis
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127779937
04120 Ubiquitin mediated proteolysis
127779937
09126 Chromosome
03083 Polycomb repressive complex
127779937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127779937
04121 Ubiquitin system [BR:
ogl04121
]
127779937
03036 Chromosome and associated proteins [BR:
ogl03036
]
127779937
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
127779937
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
127779937
Cul7 complex
127779937
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
127779937
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
127779937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
BTB
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
127779937
NCBI-ProteinID:
XP_052162831
UniProt:
I1Q811
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All DBs
Position
7:2482913..2483504
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AA seq
165 aa
AA seq
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MAAEKEEVADAAAAGSGSDTILLISSDGEHFNVPSAAASLSQLVSNMIEDDCTTNGVPLP
NVASKVLAKVIEYCIKHAAAGEEEEKDLKSFDAEFIDVDKNMLYDLLLASNFMNIKSLLD
LCCQHTANLIKGKSPEQIRKEFGIKNDFTPEEEEEIRKENTWAFE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagaaggaggaggttgccgacgccgccgccgccggcagcggcagcgacaca
atcctcctaatcagctccgacggcgagcacttcaacgtgccgtcggcggcggcgagcctg
tcacagctcgtctccaacatgatcgaggacgactgcacgacgaacggggtgcctctcccc
aacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcatcaagcacgccgccgcc
ggggaggaggaggagaaggatctgaagagcttcgacgccgagttcatcgacgtggacaag
aacatgctgtacgatctgctcctggcgtccaatttcatgaacatcaagagcttgctggat
ttgtgctgccagcacacggcgaacctgatcaaaggcaagtcgccggagcagatcaggaag
gagtttgggatcaagaacgacttcacgccggaggaggaggaggaaatccgcaaggagaac
acatgggccttcgagtag
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integrated database retrieval system