Oryza glaberrima (African rice): 127780232
Help
Entry
127780232 CDS
T08853
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00520
Amino sugar and nucleotide sugar metabolism
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
127780232
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogl01003
]
127780232
Enzymes [BR:
ogl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
127780232
Glycosyltransferases [BR:
ogl01003
]
Polysaccharide
Structural polysaccharide
127780232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
127780232
NCBI-ProteinID:
XP_052163122
UniProt:
I1QD97
LinkDB
All DBs
Position
7:25838213..25843154
Genome browser
AA seq
624 aa
AA seq
DB search
MKATLLPPPPPAKRRRGPRVAVLALFLCSLLVPLAFLFDRSQSGYVTTDERRRQEVVLPE
FHHVEKADGDGTVNGLNQDAPKKTPKVNSGGLQKHKQTDRHTSRISTKPKVLPSPKVDPS
EAVKESTQGTREVSKVRKRLDKGTNTDEVENEKACQLEFGSYCLWSREHKVVMKDSIVKR
LKDQLFVARSYYPSIAKLEGQEELTVLMKQNIQDHERVLSVSTVDADLPSFINKKMEQME
QTIARAKSCTVDCRNVDRKLRQILDMTEDEAHFHMKQSAFLYNLGAQTLPKSHHCLSMRL
TLEYFTSSSLGSNDSSAHKFSAAHGRHYVILSKNILAASVVINSTVNSSKDPKKIIFHIL
TDAQNFYAMKYWFDKKSYREAAVHVVNYEDIIKEKLTKFNVRHLYLSEEFRVLVRSTEQP
AGKTRMEYLSLFSHSHFFIPEIFKDLNKVVVLDDDVVVQRDLSFLWSLDMGDKVNGAIEF
CGLRLGQVRNLLGSTTVDTKSCAWMSGINVINLDKWRKHKVTENYLLLLKKFLTKDETSL
RAAAFPLSLLSFQHLIYPLDERLILSGLGYDYAIDEDVARSSAALHYNGNMKPWLELGIP
SYRRYWKRFLTRDDKFMDECNIIP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgacgctgctgccgccgccgccgccggcgaagaggcggagggggccacgcgtg
gccgtgctggcgctcttcctctgctcgctgctcgttcccctcgccttcctcttcgaccgc
tctcaatccgggtacgtcacgacggatgagcggcgccgacaggaggttgttttgcctgag
ttccatcacgtggagaaggcggatggtgacggtactgtcaatggactgaatcaggatgca
ccaaagaagacgcccaaagttaacagcggagggctgcagaagcataagcaaactgatcga
cacacctcccgtattagcactaaaccaaaagttcttccctcaccaaaagttgacccatca
gaggctgtgaaggagtcaactcaaggcacaagagaggttagcaaagttagaaagagacta
gacaaaggcacaaacacagatgaagtggaaaatgagaaggcttgtcaacttgaatttggt
agctactgtctctggtccagagaacacaaagtagtcatgaaggactccattgtgaaaagg
ctaaaagaccaactatttgtggcacgctcatattatccaagcattgcgaagcttgaagga
caggaggaacttactgtgctaatgaagcaaaacatacaagaccatgagagggttcttagt
gtatcgactgttgatgctgatctaccgtcctttatcaacaagaagatggagcagatggag
caaacaatagctagagcaaaatcttgcactgtagattgtcgcaatgttgacaggaaactt
cgtcagatacttgacatgactgaggatgaagctcactttcatatgaagcagagtgcattc
ctctacaaccttggtgctcagacgttgcctaagagtcatcactgtctatctatgaggttg
acattagagtatttcacatcctcttcactgggttcaaatgattcttctgctcacaaattt
agtgctgcacatggtaggcactatgtcatactatctaagaacatccttgctgcttcggtt
gttatcaactcaacagtgaacagttcaaaggacccaaaaaaaatcatttttcatatctta
actgatgctcaaaatttctatgccatgaaatactggtttgacaaaaagtcatacagagag
gcagctgtccatgtcgtgaactatgaggatattatcaaggagaagttaacaaagtttaat
gtgcggcacctgtatctgtccgaggagttccgtgttcttgttaggagtactgagcaacct
gctgggaagacaagaatggaatacctatcattatttagtcactcacatttcttcattcca
gaaatatttaaggatctaaataaggtggttgtgttggatgatgatgtggttgttcaacgt
gatctttctttcttgtggtctcttgatatgggggacaaggtaaatggtgctatcgaattt
tgtggtttaagactgggtcaagtgagaaatctcttgggtagtacaacagttgataccaag
tcatgtgcatggatgtctggaataaatgttataaatttggataaatggaggaagcacaaa
gttacagagaactacctgctgcttctgaaaaagttcttgacgaaggatgagacatctctg
cgagcagcagcctttcctctaagtttgttatctttccaacacctcatttatccccttgat
gagaggttgattctatctggacttggatatgattatgcaattgatgaagacgttgcacgg
agttctgcagcattgcactacaatggcaatatgaaaccttggcttgaattaggtatacca
agctacaggagatactggaagaggttcctaactcgagacgataaattcatggatgagtgc
aacataattccctga
DBGET
integrated database retrieval system
