Oryza glaberrima (African rice): 127780334
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Entry
127780334 CDS
T08853
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127780334
Spliceosome [BR:
ogl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127780334
Other components
Complex C specific factors
127780334
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Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127780334
NCBI-ProteinID:
XP_052163227
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Position
1:complement(21305855..21307599)
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AA seq
551 aa
AA seq
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MASVDYEGRNQGGGLPHGESSTAGETPDLGTPPASSFNTKTSGVQETATAASKCVPTIHF
VRASSGDTDHHRLSLFSPPAYCISYYPPLPPQPGSLATNQIVARLMAQMNYEEGAGLGKY
GHGIIDPIKPTIKHGKGGIGKFESPYDSDSNYDMGPPAEPELERGTGEAEPEAVVDAEEV
RAMDTLQREREAYAAARARERHHELYGPITCVVREQSESGKLTLGGLIHEFAGVKAKFPE
EYRTNRMPYKAISFATPLLHLQLSRQYNASEYGGTEPLLNRTLVMVEALKDMLGADTSAA
YPRLIHDLVMSPPLDAWRWRAEEPKPMLRFINRWKGLLPQATMDSILDEVVLPELVAAAD
VFRLMTWSSKPSICVGMWIPHLGHARLRIVYIIISRRLRDRLCGGISDYDYRLALPWKKV
FDPVSWDEHIKRHVLPHMRKALHDLEISVRMTWLQNNNFFPLVMRWASIVPVKYMVPLLI
QGFFKKWMYANYRYLMGERPRLDEAMAWYEVWKGLFTPELLAEKRVVVQLEAGLDMINRA
TQGLEISVPEH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcgactacgaggggagaaaccaaggtggtggtcttccccacggcgagagt
agtactgcaggagaaacgccggatcttggcactcctcctgcatcctccttcaacaccaag
actagtggcgtgcaggaaactgcgacggctgcaagcaaatgcgtgcccaccatccacttt
gtgcgggcgagctccggcgacacggatcaccatcgtctatcgttgttttccccacccgct
tactgcatttcctactatcccccgttgccgccgcagcccgggagcctggcgacaaatcag
atagtggcgaggttgatggctcagatgaactacgaggaaggcgccggccttggcaagtac
ggccacgggattatcgatcccatcaagccgaccataaagcacgggaaaggaggcattgga
aaattcgagtcaccgtacgacagtgactcgaattatgacatggggccgcctgcagagccc
gagctcgagcggggcaccggtgaagcagagccagaggccgttgtcgacgccgaggaggtc
cgtgccatggacacgctgcagagagaacgcgaagcctatgccgccgcgcgggcgcgggag
cggcaccacgagttgtacgggcctataacatgcgtggtccgggagcagagcgagtcggga
aagctcacgttgggcggcttgatccacgagttcgcgggagtgaaggcgaagttcccggag
gagtacaggacgaaccgtatgccgtacaaggcgatcagcttcgcaacgccgctgctccac
ttgcagctgagtcgacagtacaacgcaagtgagtacggaggcacggagccgttgctgaac
cgtacgcttgtcatggtagaagcgctcaaggacatgctaggagctgacacgtcggcggcg
taccctcgcctgatccacgatctcgtgatgtcgccacccttggatgcgtggaggtggagg
gctgaggagccgaagccgatgctacggttcatcaatagatggaagggcctccttccgcaa
gctaccatggattccatactggatgaggtcgtcttgccggagctggtagccgcggcggac
gtgtttaggctgatgacgtggtcgagtaagccgagcatttgcgtgggcatgtggattcct
catctcggccacgcccgcctacgaatagtgtacatcattataagcaggcggctcagagat
cgattgtgcggcgggatctctgactacgactacaggcttgcgttgccatggaaaaaggtg
ttcgatccagtgagctgggacgaacacatcaagcggcatgtgctgcctcatatgaggaag
gctctccatgatctcgagatctcggtaagaatgacttggctacaaaacaacaacttcttc
cctcttgttatgaggtgggcatccatcgtgccggtaaagtacatggtgccacttttgata
caagggttcttcaagaaatggatgtacgccaactatcggtacctaatgggcgagaggcct
cggctggatgaggcgatggcttggtatgaagtgtggaaagggcttttcacgccggaactg
cttgcggagaagcgcgtggtcgtgcaactcgaggctggcctcgacatgatcaaccgcgcg
acgcagggactggagataagcgtgccggagcattag
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