KEGG   Oryza glaberrima (African rice): 127780475
Entry
127780475         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127780475
   04120 Ubiquitin mediated proteolysis
    127780475
  09126 Chromosome
   03083 Polycomb repressive complex
    127780475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127780475
   04121 Ubiquitin system [BR:ogl04121]
    127780475
   03036 Chromosome and associated proteins [BR:ogl03036]
    127780475
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127780475
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127780475
   Cul7 complex
     127780475
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127780475
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127780475
SSDB
Motif
Pfam: Skp1_POZ MTTB DUF932 CC_BshC Neur_chan_memb
Other DBs
NCBI-GeneID: 127780475
NCBI-ProteinID: XP_052163349
LinkDB
Position
7:23129986..23130999
AA seq 230 aa
MAEEKGKAVMPMEVEEVEVELEVDQVEDEREAETVVEAVQKAVSDALEKVEMMEEEGEAA
VAEAADKLLEEAVEKAVTEALEEAGWDAAKKALSDDLEKVSLEAESARMITLESSDGEAV
KVKEASARLSKTIGNIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHADEKSDTDEQKEEL
KNWDKAFIDELAEDDDSLVKVIMASNYLKIDGLHNLASQCKTTREQIGKA
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcggaggagaaggggaaggcggtgatgccgatggaggtggaggaggtggaggtggag
ttggaggtggatcaggtggaggacgagagagaggccgagacggtggtggaggcggtgcag
aaggcggtgtccgatgctttggagaaggtggagatgatggaggaggagggagaggccgcg
gtggcggaggcggcggataagttgctagaggaggcggtggagaaggcggtgacggaggcg
ttggaggaggcggggtgggacgcggcgaagaaggcgttgtccgatgatttggagaaggtc
tcgctggaggcggagagcgctaggatgatcaccctcgagagctccgacggcgaggcggtc
aaggtgaaggaggcgtcggcgaggctgtccaagaccatcgggaacatcatcgacgacggc
cgcggcgacgaggccatcccgctcccggacgtcagctacaagaccctcaagaaggtggtc
gagtactgcgacaagcacgcagacgagaagtccgacaccgacgagcagaaagaggagctc
aagaactgggacaaggccttcatcgacgagctggccgaggacgacgactccctcgtcaag
gtcatcatggcctccaactacctcaaaatcgatggactccacaacctcgcctcccagtgc
aagaccacccgcgagcagatcggcaaggcctga

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