Oryza glaberrima (African rice): 127780508
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Entry
127780508 CDS
T08853
Name
(RefSeq) transcription factor MYB88-like
KO
K09422
transcription factor MYB, plant
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127780508
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
127780508
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
127780508
NCBI-ProteinID:
XP_052163389
UniProt:
I1QCF0
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Position
7:23224855..23229587
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AA seq
540 aa
AA seq
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MATGPDLTPPAAAAAASAEAPSASAAKKDRHIVSWSAEEDDVLRTQIALHGTDNWTIIAA
QFKDKTARQCRRRWYNYLNSECKKGGWSREEDLLLCEAQKVLGNKWTEIAKVVSGRTDNA
VKNRFSTLCKRRAKDDELFKENGSLCSSASAKRALAQTECLTSGASGSAPPIKQMRPCNS
DFKENMTPNMRLVGQDKSTQDSRQPLAIVYQNNQDNMNTMDTQNLVAKTAAKQLFAGEHD
CVKHEGNFLNKDDPKIVTLLQRADLLCSLATKINTENTSQSMDEAWQQLQHHLDKKDDND
MSESSMSGMASLLEDLDDLIVDPYENEEEEDQNLREQNEQIDMENKQNSSQTSMEVTSQM
VPDNKMEDCPNDKSTEDNNMEPCPGEDIPTSENLTEAAIEDSLLQCVEYSSPVHTVIQAK
TDAEIAASENLSEVLEHNRLQCIKLASPAQTTTPVEANAETPASEKLSEVVKCKNPPRMG
FTSPAHTVPTFLPYADDMPTPKFTASERNFLLSVLELTSPGSRPDTSQQPSCKRALLNSL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggacccgatctgaccccacccgccgccgccgccgccgcctccgccgaagcg
ccgtcggcgtcggcggccaagaaggaccgccacatcgtgagttggagcgccgaggaggat
gatgtgcttcgtactcaaattgcgcttcatggaactgataactggacaattatagcggca
caattcaaggacaagacggccagacagtgcaggagaagatggtacaattatttgaactca
gagtgcaagaaaggagggtggtccagagaagaggacttgctattgtgtgaggctcaaaaa
gttcttgggaacaaatggactgaaatagcaaaggttgtctcaggcagaactgataatgca
gtgaagaatcggttttctactctatgcaaaaggcgggccaaggatgacgagctattcaag
gaaaatggatcattatgttccagtgcaagtgcaaagagggcattggcacaaaccgagtgt
ctcacatctggtgcaagtggctctgcaccacctattaagcagatgaggccatgtaattct
gatttcaaagagaatatgacaccaaatatgagattagttggacaagacaagagcacacaa
gattctcgacagcctcttgcaattgtttatcaaaacaatcaagataatatgaatacgatg
gacacccaaaatcttgttgctaaaactgcagcaaaacaattatttgcgggggaacatgat
tgcgttaagcatgagggtaattttttgaacaaggatgatccaaaaattgttactttattg
cagcgagctgatttgctttgctccctagcaacaaaaataaatactgaaaatacgagccaa
agcatggacgaagcctggcagcaactacaacatcatttggataagaaagatgataatgac
atgtcagagagcagtatgtcgggaatggcttcacttctagaggatcttgacgatttaatt
gtagacccctatgagaatgaagaggaagaagaccagaatttaagggagcagaacgaacag
attgatatggagaacaagcaaaattcttcacaaactagcatggaagttacatcacaaatg
gttcctgacaataaaatggaggactgcccaaatgataagagcacagaagacaataatatg
gaaccttgccctggtgaagacataccaacatctgaaaacttgactgaggctgctatcgaa
gatagcttgcttcaatgtgtggaatacagctctcctgtacacacagttattcaagctaaa
acagatgcagaaatagcagcatcagagaaccttagcgaggttctcgaacataacaggctt
cagtgtattaaattagcctcccctgctcagacaactaccccagttgaagcaaatgcagaa
acaccagcttctgagaagttaagcgaggttgtcaaatgtaaaaatcctccacgcatggga
ttcacttcacctgctcatacagtcccaacattcctgccatatgcagatgacatgccgact
ccaaaatttactgctagtgagaggaattttttgctgtctgtgcttgagttgacctcgcca
gggtcgaggccagacacttctcagcagccttcttgcaaaagggctctccttaatagccta
tga
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