Oryza glaberrima (African rice): 127780516
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Entry
127780516 CDS
T08853
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127780516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127780516
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127780516
Membrane trafficking [BR:
ogl04131
]
SNARE
Syntaxin (Qa)
Stx-PM
127780516
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127780516
Exosomal proteins of other body fluids (saliva and urine)
127780516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Exo70_N
dCache_3
Vac_Fusion
DUF6548
PigL_N
Fusion_gly
YcbB
cas_Cpf1_2nd
Metal_resist
Motif
Other DBs
NCBI-GeneID:
127780516
NCBI-ProteinID:
XP_052163399
UniProt:
I1Q8A7
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Position
7:complement(3579814..3583711)
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AA seq
303 aa
AA seq
DB search
MNNLLTDSFELPRGGSSRDGDIEMGMQADPSDNLKGFLKKVDAIESLIAKLTNLLHKLQT
ANEESKAVTKARDMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGKGSA
VDRSREQTTGAVKKKLKERMDDFQVLREAIRQEYRDVVERRVFTVTGSRPDEETVDNLIE
TGRSEQIFQEAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVDAQGD
MINNIETHVSNATNHIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK
KGA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaagagatggg
gacattgaaatgggaatgcaagctgatccttcagacaatctaaaaggtttcttgaaaaag
gttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataagcttcagact
gcaaatgaggaatccaaagcggttacaaaagcaagggacatgaaagcaattaaacagagg
atggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagacaaaagttgat
gaattggaaaaagataacttatcaaacagacaaaagcctggatgcgggaaaggatctgcg
gtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaaggagcgcatg
gatgattttcaggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaaga
agggtgtttacagtaactggtagtcgtcctgatgaagagacagttgacaatttaatagag
actggaagaagtgagcaaattttccaagaagctatccaacagcagggaagaggccaaata
ctggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaag
cttctggagttgcagcagatattcatggatatggcagttttggttgatgctcaaggagac
atgatcaacaacatagagacacatgtttcaaatgctaccaaccacatacaacaaggcgtc
agtgctctacagaacgcgaagaagctccagaagaactccaggaagtggatgtgctacgcc
atcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatccagccatggaag
aagggtgcttga
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