Oryza glaberrima (African rice): 127780561
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Entry
127780561 CDS
T08853
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127780561
Membrane trafficking [BR:
ogl04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
127780561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Occludin_ELL
Tox-PLDMTX
Prominin
Hydro_N_hd
ABC2_membrane_3
DNA_repr_REX1B
GCIP_C
CAP_N
DUF6988
Motif
Other DBs
NCBI-GeneID:
127780561
NCBI-ProteinID:
XP_052163446
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All DBs
Position
7:23673987..23676789
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AA seq
266 aa
AA seq
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MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIK
EFDRILKEDEKKNSADVNKQLNDKKQLMIKELNSYVTLRKTYQSSLGNKRIELFDTGNDQ
VAEDNTVQMASEMSNQQLMDAGRKQMDQTDQVIERSKKVVAQTVEVGSQTAAALSQQTEQ
MKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNK
NIRDIPGLAPPAQNRKLLSIESFGSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagccccgagctggagcaggtggacggcgagatccaggac
atcttccgcgcgctccagaatgggttccagaagatggacaagatcaaggactccaacagg
cagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcgcttaatcaaa
gaatttgatcgtattctcaaagaggatgagaaaaagaactcggctgatgtcaacaagcag
ctaaatgataagaagcagctgatgatcaaagaattgaattcctatgtcacattgaggaaa
acgtaccaaagcagcctgggtaataagaggattgaactatttgatactggtaatgatcag
gtggccgaggacaacactgttcaaatggcatcagaaatgtcaaatcaacaactcatggat
gccggaaggaaacagatggaccaaacagatcaagttattgagcgttcgaaaaaggttgtt
gcacaaaccgttgaagttggatctcaaactgctgcagctctatcacaacaaacagaacaa
atgaagagaattggcaatgagctagactcggttcacttttcactgaagaaggctagccaa
atggtgaaagagattggtcgccaggttgcaactgacaaatgcatcatggcattcctattt
ctgatagtctgtggtgtgattgcaatcattgttgttaagattgtcaaccctcacaacaag
aacatcagagacatcccaggactggcaccacctgcgcagaacaggaagctcttgtccata
gaatctttcggaagcctctga
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