Oryza glaberrima (African rice): 127780635
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Entry
127780635 CDS
T08853
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127780635
03041 Spliceosome [BR:
ogl03041
]
127780635
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127780635
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127780635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
127780635
NCBI-ProteinID:
XP_052163530
UniProt:
I1QC59
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All DBs
Position
7:22620655..22625575
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AA seq
427 aa
AA seq
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MLPQQQQQQKQQAAALMPPSMYAMPPPPPLHHHHHPLLAAAPPQQQIEPILTGNLPPGFD
TSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAIL
TLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDAR
VMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNAQWLGSRQIRCNWATKGASNGEQQTSDS
KNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEE
VRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNKPTPPGTTSAPLPPPAA
PSVTAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQAMGMGAGVSQAMYDASFPNVGPS
QQQLMYY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcagcagcagcagcagcagaagcagcaggcggcggcgctgatgccgccgtcc
atgtacgcgatgccgccaccgccgccgctccaccaccaccaccacccgctcctcgccgcc
gcgccgccccagcagcagatagagccaatccttactggaaatctgcctcctggctttgat
acgagtacatgccgcagtgtatatgttggcaatgttcatgttcaagtcacagaggcactt
ctccgagaggtttttcagagtactggtttagttgaaggatgcaagcttatacgaaaagag
aagtcatcttatggctttgttgactactatgaccgcagatcagctgcattagcaattttg
acacttaatggaaagcaaatttttgggcagcttatcagagttaattgggcatatgctagt
gggcagagggaggacacaacagaccatttcaatatttttgttggtgatcttagcccagag
gttactgattccgcattatttgcattcttctctggatattccagttgctctgatgcccga
gttatgtgggatcaaaagactggaagatctagaggttatggctttgtttccttcaggaat
caacaggatgcacaaagtgccataaatgacctaaatgcacaatggcttggaagtcggcag
atacgctgcaactgggcaacaaagggtgccagcaatggcgagcagcagacttcagattca
aaaaacgtagctgatctgactaacaatttgacagaagacgggaaggagaaagcaaatgaa
gatgccccagagaacaatccacagtacagaactgtttatgttggaaaccttgctcacgag
gttactcaagatgtgctccatcgtcttttccacgcacttggagctggggccatcgaggag
gtccggatccagcttggcaaaggatttggcttcgtcagatacagcaaccacgcagaagcc
gccctcgcaatccagatgggaaacggtcgcattctaggtggtaaaccaatcaagtgttcc
tggggcaacaagccgacgccacctggcaccacgtcggcgcctctgccccctcccgccgct
cccagcgtgacggcggccgatctcctcgagtaccagcgcagcctcgccttgagcaagatg
gtgtcaagccaggcgctgatgcaggctcaggcacagcagcatctgaagcaggcaatgggg
atgggtgcaggcgtgagccaggccatgtatgatgccagcttccccaacgttggcccctcg
cagcagcagctcatgtactactga
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