KEGG   Oryza glaberrima (African rice): 127780949
Entry
127780949         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127780949
   04120 Ubiquitin mediated proteolysis
    127780949
  09126 Chromosome
   03083 Polycomb repressive complex
    127780949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127780949
   04121 Ubiquitin system [BR:ogl04121]
    127780949
   03036 Chromosome and associated proteins [BR:ogl03036]
    127780949
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127780949
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127780949
   Cul7 complex
     127780949
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127780949
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127780949
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 127780949
NCBI-ProteinID: XP_052163903
LinkDB
Position
7:<23149439..23149933
AA seq 164 aa
EEEKESGSSRMITLKSNDEKLVEVTEASARQSRAITNLIDDGCADVIPLPNVDSKTLAKV
IPYCDEHGRANSGTDEERAALGRFDADFVGELDKDKASLIDVIMAANYLNIQGLLDITCQ
RVADTIGSATAEEIREAFDIEDDLTEAEKKEIREENAWAFDGIP
NT seq 495 nt   +upstreamnt  +downstreamnt
gaggaggagaaggagagcggcagcagcaggatgatcaccctgaagagcaacgacgagaag
ctggtcgaggtgacggaggcgtcggcgaggcaatccagggccatcacgaacttgatcgac
gacggctgcgccgatgtcatcccgctccccaacgtcgactccaagaccctcgcgaaggtg
atcccgtactgcgacgagcacggcagggcgaactccggcaccgacgaggagagggcggcg
ctggggaggtttgacgcggacttcgtcggcgagctggacaaggacaaggcgtccctcatc
gacgtcatcatggccgccaactacctcaacatccaggggctcctcgacatcacctgccag
cgcgtcgccgacacgatcgggagcgccaccgccgaggagatccgcgaggcgttcgacatc
gaggacgacctcaccgaggcggagaagaaggagatccgcgaagagaacgcctgggccttc
gacggcatcccgtaa

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