Oryza glaberrima (African rice): 127780949
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Entry
127780949 CDS
T08853
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
ogl04120
Ubiquitin mediated proteolysis
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127780949
04120 Ubiquitin mediated proteolysis
127780949
09126 Chromosome
03083 Polycomb repressive complex
127780949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127780949
04121 Ubiquitin system [BR:
ogl04121
]
127780949
03036 Chromosome and associated proteins [BR:
ogl03036
]
127780949
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
127780949
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
127780949
Cul7 complex
127780949
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
127780949
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
127780949
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
127780949
NCBI-ProteinID:
XP_052163903
LinkDB
All DBs
Position
7:<23149439..23149933
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AA seq
164 aa
AA seq
DB search
EEEKESGSSRMITLKSNDEKLVEVTEASARQSRAITNLIDDGCADVIPLPNVDSKTLAKV
IPYCDEHGRANSGTDEERAALGRFDADFVGELDKDKASLIDVIMAANYLNIQGLLDITCQ
RVADTIGSATAEEIREAFDIEDDLTEAEKKEIREENAWAFDGIP
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gaggaggagaaggagagcggcagcagcaggatgatcaccctgaagagcaacgacgagaag
ctggtcgaggtgacggaggcgtcggcgaggcaatccagggccatcacgaacttgatcgac
gacggctgcgccgatgtcatcccgctccccaacgtcgactccaagaccctcgcgaaggtg
atcccgtactgcgacgagcacggcagggcgaactccggcaccgacgaggagagggcggcg
ctggggaggtttgacgcggacttcgtcggcgagctggacaaggacaaggcgtccctcatc
gacgtcatcatggccgccaactacctcaacatccaggggctcctcgacatcacctgccag
cgcgtcgccgacacgatcgggagcgccaccgccgaggagatccgcgaggcgttcgacatc
gaggacgacctcaccgaggcggagaagaaggagatccgcgaagagaacgcctgggccttc
gacggcatcccgtaa
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integrated database retrieval system