KEGG   Oryza glaberrima (African rice): 127781455
Entry
127781455         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127781455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127781455
Enzymes [BR:ogl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127781455
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127781455
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127781455
NCBI-ProteinID: XP_052164370
LinkDB
Position
8:complement(3492053..3502303)
AA seq 1244 aa
MEDPEITGQQSPNATSIVTDLMDLDDIIVEGNEVQFAMDVDLRAIPSLKDGGHTDPLVQI
PGDMSHMDVDLRVIPSLKDGGHADPPVQVPVDKRIASLEKLCKEASRSFFRETRLVSHQI
NSYNDFVSHGLQKMFDSLDEVTVEPDYDPSKKVGPWRHATIKFGRVELEEPVFWVDNCDL
DVETLKLKPKHARLQKMTYSSKMKVEMTVQVYSLHKSDKAKTGEDPYIQRKDIMKETKWV
TIGKLPVMVKSNLCWLHKLQESECEYDFGGYFLIKGMEKVFVAEEQRCLSRIWINDSPTW
EACYQQSQIRREKISIKPVQSNDGFRKVINLYFLGATIPIWIMFFALGVSSDKEAFDIID
IQECDASMANIISATITESHEQCEGFQREGRASEYIDKLIRNTKFPPKGSFDEYIGRHMF
PDVSGNRSKALFLGYMVRCLLLASSGNRKSDNRDDFRNKRLDLACELLQRELWVHIMHAQ
KRMVKVMQRHLSGDSDLQPLECYVHASIVTNGLNRAFSTGSWCHPFNKRERCSGIVATLR
RTNPLQMMSDMRKTRQWVAYAGKAGDARYPNPSYWGKLCFLSTPDGEKCGFVKNLAITAI
VSCLAREPSVDALVSCGMKKLDELLLQEISGKDRIFLNGNLVGVCADSVEFVLHLRSMRR
RKQIDAQVEIKRDKQNKEVRIFSDPGRILRPLLIIENLRNIMNRKNGSYSFQELMDQNII
ELIGVEEEEDIRCAYGIRHLFAGDEEKNFSFYTHCELDPSFLLGLSCSIIPFANHDTAKR
ILMQAEKISQQAIGYSTTNPLFRVDTHSHQLYYPQRPLFKTVAADCLGKRDYTSGSKHDF
ARPEYFNGQNAIVSISVHQGFNQEDSLVLNRASLERGMFRTQHFKSYKALIENKEITKRL
KHKENINFGKTPSKKGLVDSLDIDGLPYIGASLQSNDIIIGKVSDSGEDHSIKLLHTEKG
IVEKVVLSATDDGTNSAFVILRQTRSPRIGDKFASMHGQKGVIGFLDSQENFPFTHQGIV
PDIVINPHGFPTRQTPGQLLEAALGKGIALGGATRYATPFTSPSVEVITEQLHKAGFSRW
GGESVINGRTGERAASPVFTGPTFYQRLHHMAEDKVKFRNTGPVHPLTRQPVEDRRRYGG
VKFGEMERDCLLAHGAAANLHERLFLLSDVSRLHVCRRCQRTAVVVSRAVAANGGGGRKV
RGPYCRFCRSAEEVVRVSVPYGAKVLYQELFSMGICLKFDTELI
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggaagatcctgaaattactggtcagcagtcaccaaatgccacaagtattgtgacggat
ctcatggatttggatgacattattgttgagggcaatgaggtacagtttgctatggatgtg
gatttgagagcaataccatctctgaaagatggagggcacacagacccactggtacaaatc
ccaggtgacatgtctcatatggatgtggatttgagagtgataccatctctgaaagatgga
gggcatgcagacccaccagtacaagtcccagttgacaagaggattgcaagcctagagaag
ctctgtaaagaagcatcaagatcatttttcagggaaactaggctagttagccatcagata
aactcctacaatgattttgtctctcatgggctccaaaagatgtttgattctctcgatgaa
gttactgtcgagcctgactatgatccttcaaagaaagtaggcccctggaggcacgcgacc
atcaagtttggtcgagtggagcttgaggagccggtgttttgggtcgacaactgtgatctt
gatgtggaaacactcaaactgaagcctaaacatgctcgcctccagaagatgacatactct
tcaaagatgaaagtagaaatgactgttcaggtctattcactccacaaaagcgacaaagct
aaaactggcgaggacccatatatacaaagaaaagatataatgaaagagactaaatgggtc
actattggcaagttacctgtcatggtgaagtcaaatttgtgctggctgcataaacttcag
gaaagcgaatgcgagtatgattttggtggatattttcttatcaagggaatggaaaaggta
ttcgttgctgaagagcagagatgcctctccaggatttggatcaatgacagccccacctgg
gaggcttgttaccaacagtctcaaatccgacgagaaaagatctctataaaacctgttcag
tctaatgatggtttcagaaaagtcattaacctgtactttttgggtgcaactataccaatc
tggataatgttttttgcactaggtgtatcatcagacaaagaagcttttgatattattgac
atacaagaatgtgatgcttccatggccaacataatatcagctactataactgaatctcat
gagcagtgcgaaggctttcagagagaagggagagccagtgaatatattgataagttgatc
aggaatacaaagtttccaccaaaaggatcctttgatgagtatattggtaggcatatgttt
cctgatgttagtgggaataggagcaaagcactcttcttgggatacatggtgagatgtctt
ctattggcttcctctggcaatcggaagagtgataatagggatgatttccgcaacaagagg
ctggatttggcatgtgaattgctccagagagagctatgggtacatattatgcatgcccag
aaacgtatggtcaaggtcatgcagagacatttgagtggtgatagtgacctacaacctctt
gagtgttatgtccatgcatcaattgttaccaatggtctcaaccgtgccttctccactggt
tcctggtgccatccatttaataaaagagagaggtgttcagggatcgttgcaacccttagg
agaacaaatcctcttcaaatgatgtctgacatgaggaagacacgacaatgggttgcatat
gctggaaaggctggagatgctagatatccgaatccatcatattggggaaagctatgtttc
ttgtccactcctgatggtgaaaagtgtggatttgtgaaaaatcttgccattactgctatc
gttagttgtttggcaagggagccctcggttgacgcacttgtttcttgtgggatgaagaaa
ctggatgaactgcttctacaagagatcagcgggaaagacagaatcttcttgaatggaaac
ttggttggagtttgtgcagactcagtcgagtttgttttgcacttaaggagcatgagacgc
aggaagcaaattgatgcacaggtggagatcaaaagggacaagcaaaacaaagaagttcgt
atattttccgatccaggaaggattctaagacctcttcttattatcgaaaatctacgaaac
atcatgaatcgaaagaatggatcatactccttccaggaacttatggatcaaaatataatt
gagctgattggtgttgaagaagaggaggatatccggtgtgcttatggaattaggcatctc
tttgcaggggacgaagaaaagaatttctcattctatactcattgtgaacttgacccttct
ttcttgctaggattgagttgcagtatcattccctttgccaaccatgatactgctaagaga
attctaatgcaagctgaaaagatatcgcaacaggctattggctactccactacgaatcct
ctctttagagttgatacacattcccatcagctctattatccacagagacctctgttcaaa
actgtagctgctgattgtcttggtaagagagactatacatctggaagcaaacatgacttt
gccagaccggagtatttcaatggccaaaatgcaatagtctcaatcagtgtccatcaggga
tttaaccaagaggattctttggtattgaatagggcctctttagagcgtggcatgtttcga
acacaacattttaagagctataaagcactgatagaaaacaaagagatcaccaaacgatta
aaacacaaggaaaatatcaattttggaaaaactcctagcaagaaaggcctggttgacagt
ttagatattgatggcttaccatatattggagcaagtcttcagagtaatgacattatcatt
ggaaaggtctcagactctggtgaagatcatagcatcaagctgctacatactgaaaaagga
atagtggagaaggttgttctttcagctactgatgatgggacaaattctgcgtttgttatt
ctaagacagactcgctcgccacgcattggagacaagtttgccagcatgcatggccagaaa
ggagtcattggcttcttggattcccaggagaacttcccttttactcaccaaggcatagtt
cctgacattgtgatcaatccccatggctttccaactcgtcagactcccggccaacttctt
gaagctgcactaggcaaaggaatcgccctcggcggtgccacccggtatgcgacaccgttc
acaagtccatctgtggaagtgatcacagagcagctgcacaaggctgggttctcgaggtgg
ggaggggagagcgtgatcaacggccgcaccggcgagcgtgcggcgtcgccggtgttcacc
gggccgacgttctaccagcggctccaccacatggccgaggacaaggtcaagttccggaac
accggcccggtgcacccgctgacgcggcagccggtggaggaccgccgccggtacggcggc
gtcaagttcggcgagatggagcgcgactgcctcctcgcccacggcgccgccgccaacctc
cacgagcgcctcttcctcctcagcgacgtgtcgcgcctccacgtctgccgccgatgccag
cgcaccgccgtcgtcgtgtcgcgcgccgtcgccgccaacggcggcggcggccggaaggtg
agggggccgtactgcaggttctgcaggtcggcggaggaggtggtgagggtgagcgtgcct
tatggcgccaaggtcctctaccaggagctcttctccatgggcatctgcctcaagttcgac
accgagctcatctag

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