Oryza glaberrima (African rice): 127781566
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Entry
127781566 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127781566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127781566
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127781566
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
YflT
Motif
Other DBs
NCBI-GeneID:
127781566
NCBI-ProteinID:
XP_052164494
UniProt:
I1QJM1
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All DBs
Position
8:complement(21205716..21208600)
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AA seq
285 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA
FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDRSRSR
SPRRRHRDDHRDRERRGRSRSRSRERHGRDRDRDHRRHSRSRSRSRSRSRSLSPDYKNRR
RGRDDDKRRSKSKSKSRSKSRSRSKSRSKSRSRSRSRSRSRSYHSASPTRHSASPPRKGS
TPRRSPARNGSPEKETNGKGSPPSRSVSPSPQRAGSRSPGSDDKE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggaggtcggggccgccggacatccgcgacaccttctcgctcctcgtc
ctcaacatcagcttccgtaccacggccgacgacctcttcccgctcttcgaccgctacggc
aaggtcgtcgacgtcttcatcccgagggatcggaggactggggactcgaggggattcgcg
ttcgtgcgctacaagtacgctgaagaggcgcagaaggctatagatcggcttgatgggcgt
aatgtggatgggaggaacatcatggtgcagtttgccaagtatgggcccaatgcggagcca
atacgaaaaggaaggatcatagaagaggttgagaaatcacgggacaggtcaagaagccgt
agcccaaggcgaaggcacagagatgaccacagagatagagaacgcaggggccgaagtcgc
agcagaagcagagaaaggcatggccgtgacagggatagggatcatcgtcgtcacagcaga
agcagaagcagaagcagaagccgaagccgaagcttaagcccagactacaagaaccgtcgt
agaggaagagatgatgataagcgtaggagcaagagcaagagcaagagcaggagcaaaagc
aggagcaggagtaagagcaggagcaaaagcagaagcaggagcagaagcaggagtcggagc
cgctcatatcatagtgcatcgcctactcggcacagcgctagccctcctcgcaagggatca
acaccacgcaggagccctgctcgcaatggaagtcctgaaaaagagacaaatggaaaaggt
tcacctccttcacgcagtgtttcaccatcaccacagcgtgctggctcccgaagcccaggt
agtgatgacaaggaataa
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