Oryza glaberrima (African rice): 127781580
Help
Entry
127781580 CDS
T08853
Name
(RefSeq) probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00740
Riboflavin metabolism
ogl00790
Folate biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl01240
Biosynthesis of cofactors
Module
ogl_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
127781580
00790 Folate biosynthesis
127781580
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
127781580
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
127781580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
127781580
NCBI-ProteinID:
XP_052164512
UniProt:
I1QJJ3
LinkDB
All DBs
Position
8:20993084..20998581
Genome browser
AA seq
546 aa
AA seq
DB search
MDSCTANLMSRLSSIYSQHRTSGLRSDRSIMPNSTSNSLRTISSVHLPYNHRARNFHISH
AAGDSSEHVIINGQASPSKVVQADAAALGTIAADMAPVVDGFSADDDELDLDSPTEGFSS
IPEAIEDIRQGKYVIVVDDEDRENEGDLIMAASKVTPEAMAFIVRHGTGIVCVSMKEDDL
ERLELPLMVTTKENEEKLRTAFTVSVDAKEGTTTGVSAKDRANTVLALASPNSKPEDFNR
PGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPAAVLCEIVDDDDGSMALLPKLQDFA
RRENLKIISIADLIRYRRKRDRLVERVCVTPLQLQWGSFQSYCYRSLIDGMEHIAMVKGD
VGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMTMIEKTGRGVVVYLRGHEGRGIGL
GHKLRAYNLQDDGRDTVEANEDLGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGL
KGYGLSVLGRVPLLTPITNENRRYMETKRLKMGHVYGTRPSGNTSTLADGGIKKEQDQID
SASEQE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggattcctgtactgcaaatctcatgtcacggctgagcagcatttacagccaacacagg
acttctggattgcggtctgatcgttcaattatgccaaattctacatcaaacagtttgagg
acaatcagttctgttcacttgccgtataaccatcgggccagaaattttcatatatctcat
gctgcgggtgattcttcagaacatgttattataaatggacaggctagtccttctaaagtg
gttcaagcagatgctgctgcacttgggaccatagctgctgatatggcacctgttgttgat
ggtttttctgctgatgatgacgagcttgacctagacagcccaactgagggtttctcatcc
attcctgaagctattgaggatattcgccaaggaaaatatgtgattgttgtggacgatgaa
gatagagagaatgaaggagatcttataatggcagcatcaaaggtgacacctgaggctatg
gctttcatagtgaggcatgggacaggcattgtatgtgtcagcatgaaagaagatgacctg
gaaagactagaacttcctcttatggtgacaacaaaggaaaatgaagagaagctgcggact
gccttcactgtttcagtggatgctaaagaaggcacaacaacaggggtttcagctaaggat
cgggcaaatacagtcttagcacttgcatctcctaattctaagcctgaagactttaacagg
ccaggacatatttttcctcttaaatatagagaaggaggtgtgctgaaaagggctgggcat
actgaagcatcagttgaccttgccatgttggctgggttacctcctgctgctgttctttgt
gaaattgttgatgatgacgatggatccatggctttattgccaaaactccaagattttgca
agaagggagaacctgaagataatttcaattgcggacttgattaggtataggaggaagaga
gacagattggtagaacgtgtttgtgttacacctttacaattacaatggggatcatttcaa
tcttattgctaccgatctcttattgatgggatggagcacattgctatggtcaagggtgat
gttggtgatggccaggatatcttagtgcgagtgcattcggagtgcctaactggagatata
tttggatcagccaggtgtgattgtgggaatcaacttgccctggcaatgaccatgattgag
aagactggcaggggtgtagtagtttaccttcgtggacatgaaggtaggggcattggtttg
ggtcacaagcttcgtgcatacaatttgcaggacgatgggcgggatactgttgaggctaat
gaggatctaggtctgccggttgattcacgagagtacggtattggtgcacagatactacga
gatcttggtgtccgaaccatgaggcttatgactaacaatcctgcgaaatatactggactg
aagggctatggtttgagtgtcttgggcagagtgccactgttgacaccaataaccaatgag
aatcggcgttacatggaaacaaagagattaaagatggggcatgtttatggaacccggcct
agtggtaatacaagcaccttggctgatggcggcataaaaaaggagcaagatcagattgac
agtgctagcgagcaagagtaa
DBGET
integrated database retrieval system
