Oryza glaberrima (African rice): 127781830
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Entry
127781830 CDS
T08853
Name
(RefSeq) RNA-binding protein 208
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127781830
03041 Spliceosome [BR:
ogl03041
]
127781830
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127781830
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127781830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
127781830
NCBI-ProteinID:
XP_052164854
UniProt:
I1QK86
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All DBs
Position
8:complement(22907821..22913698)
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AA seq
447 aa
AA seq
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MNGAGGNHQQQQQQQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISN
GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR
RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA
YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE
EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR
HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPP
GTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVSA
GLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccggcgggaaccaccagcagcagcagcagcagcagcagcggctcaggcag
cagcagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagcagtaccag
tccggcgtcctcgccgccgccgccgcggcggccatgacccagatggagcctatttcaaat
ggcaatcttccaccagggtttgatccatccacatgtcgcagtgtgtatgttgggaatgtg
caccctaatgttactgagagccttctaatcgaagttttccagagttctggccttgtggaa
agatgcaagctcatccggaaggagaagtcttcctttggttttgttgactattatgatcgg
aggtcagcggctcttgcaataatgacccttcatggtcgtcacatatgtggccaagcaatc
aaggtgaactgggcttatgcaagtacacagagggaggatacatctgggcatttccatatt
tttgttggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagca
tatccttcttgttctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggt
tatggttttgtctccttccgtaatcaacaggaagctgagactgctataactgaaatgact
gggaaatggcttggaagcagacaaataaggtgtaattgggcaacaaagaacaatgcagaa
gagaaacaagaaactgacaaccataatgcagttgtactaacaaatggtagttctagtaat
ccaggaatggaggcaagtcaggacaccggaagtaaagagaatccagagaacaaccctgat
tgtactacggtgtatgttggcaaccttggacatgaggttaaccgagatgagcttcaccgc
cacttctataatttaggtgttggggctattgaggaagttcgcgttcaacaggataaagga
tttgggtttgtgagatacagtaaccatggcgaagcagcattggctattcagatggccaat
ggattggtagtgcgtgggaagccgatcaagtgctcatggggcaacaaacctaccccacct
ggtacatcctccaagccattgccaccgccacttccttcatatcaacccgtaccaatggca
ggtgtgccacaaggtttctcggcagctgatatcgtagcatatcagaggcaacttacctta
agccaggtcgcagctgggcagattgctggccagcatggccttgcaggtcaggtatccgca
gggcttcttgctgctggctcccaggccctctacgacgggtacccgaaccagtcatcagcg
caacagcttatgtactacaactag
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