KEGG   Oryza glaberrima (African rice): 127781830
Entry
127781830         CDS       T08853                                 
Name
(RefSeq) RNA-binding protein 208
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127781830
   03041 Spliceosome [BR:ogl03041]
    127781830
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     127781830
Spliceosome [BR:ogl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    127781830
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_10 RRM_5
Other DBs
NCBI-GeneID: 127781830
NCBI-ProteinID: XP_052164854
UniProt: I1QK86
LinkDB
Position
8:complement(22907821..22913698)
AA seq 447 aa
MNGAGGNHQQQQQQQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISN
GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR
RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA
YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE
EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR
HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPP
GTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVSA
GLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaacggcgccggcgggaaccaccagcagcagcagcagcagcagcagcggctcaggcag
cagcagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagcagtaccag
tccggcgtcctcgccgccgccgccgcggcggccatgacccagatggagcctatttcaaat
ggcaatcttccaccagggtttgatccatccacatgtcgcagtgtgtatgttgggaatgtg
caccctaatgttactgagagccttctaatcgaagttttccagagttctggccttgtggaa
agatgcaagctcatccggaaggagaagtcttcctttggttttgttgactattatgatcgg
aggtcagcggctcttgcaataatgacccttcatggtcgtcacatatgtggccaagcaatc
aaggtgaactgggcttatgcaagtacacagagggaggatacatctgggcatttccatatt
tttgttggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagca
tatccttcttgttctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggt
tatggttttgtctccttccgtaatcaacaggaagctgagactgctataactgaaatgact
gggaaatggcttggaagcagacaaataaggtgtaattgggcaacaaagaacaatgcagaa
gagaaacaagaaactgacaaccataatgcagttgtactaacaaatggtagttctagtaat
ccaggaatggaggcaagtcaggacaccggaagtaaagagaatccagagaacaaccctgat
tgtactacggtgtatgttggcaaccttggacatgaggttaaccgagatgagcttcaccgc
cacttctataatttaggtgttggggctattgaggaagttcgcgttcaacaggataaagga
tttgggtttgtgagatacagtaaccatggcgaagcagcattggctattcagatggccaat
ggattggtagtgcgtgggaagccgatcaagtgctcatggggcaacaaacctaccccacct
ggtacatcctccaagccattgccaccgccacttccttcatatcaacccgtaccaatggca
ggtgtgccacaaggtttctcggcagctgatatcgtagcatatcagaggcaacttacctta
agccaggtcgcagctgggcagattgctggccagcatggccttgcaggtcaggtatccgca
gggcttcttgctgctggctcccaggccctctacgacgggtacccgaaccagtcatcagcg
caacagcttatgtactacaactag

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