Oryza glaberrima (African rice): 127781846
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Entry
127781846 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127781846
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127781846
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127781846
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127781846
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127781846
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127781846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
127781846
NCBI-ProteinID:
XP_052164869
LinkDB
All DBs
Position
8:complement(23296165..23301274)
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AA seq
722 aa
AA seq
DB search
MYSEKKKARARDGYGDRDAAERRKGKAPCLEPPPTPPRAMAAAAAAEAGPSRGGCVPSRN
PLKDPGDCEAVAIRDTDGEDCGHFSCDMDEIADIEMGMAARGDPMCEHETCLATGSNLMM
VCPECGWCFCVGGLAHRAKPLGHIREHAYRRAHWVALRCEDPCEGYCFECEDSLAIESQM
VADDGAGGGEEGYGCVVTGMPNLGNTCYLNALLQCLLVLRKLRARILGPGAPSGVLGDLL
HDLFVGTNGPSYARRLLDPAMLLRCVRFRYPQFRGIAMQDCHELLCCLRDGLDEDERKWR
AGKMQQGAPSAVAPTVIDSIFAGQLSVTLSCKCCSFKSDSEEVFHDLSMPLPPKGTPARS
VASPPRNGRCISQQKTRMELFPAINKTNTEKIHAISEGGDAQVPASESEHMVMVKTSEPL
EIDSNHLEQISQSKGDVHGPLQAPTREENTLIASGHGVERTVSAVLDSIKPEDSIEAKMD
TLSAEVATEDKGKDRNRDAVYDKADDINSLASIEEILELHLKAEMIEKRCENCSNADKKA
SPISGKHGEQPVACTNVNGTVDGDQDEQDQGRGKQVNMGHSAHQVEENQYDRPDRNKGAI
KTCLFSKLPPVLALHLKRNLWPLKLKVSGHVSFKETLDVKLFMHPSSEDKDNSSYRLVGV
VEHLGLCMDAGHFVAYVRPSCPQQTNGSSLWFCASDADIREVSLEEVLKCEAYLLFYERI
EG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggagaagaagaaggcaagggcgagggatgggtatggggatcgggatgctgcc
gagagacggaaggggaaggccccatgcctggagccgccgccgacaccgccacgcgcgatg
gcggcggcggcggcggcggaggccggtccttcacgcggcggctgcgttccgtcacggaat
cccttgaaggatccgggggattgcgaggcggtggccatcagggacaccgacggcgaggac
tgcggccacttcagctgcgacatggacgagatcgctgacatcgagatgggcatggccgcc
cgcggcgacccgatgtgcgagcacgagacgtgcctggccaccgggagcaacctcatgatg
gtgtgccccgaatgcggctggtgcttctgcgtcggagggctagcccacagggccaagccg
ctggggcacatcagggagcatgcctaccggagggcgcattgggtcgcgctgcgctgcgag
gatccgtgtgagggttactgcttcgagtgtgaggattcattggcaattgagagccagatg
gtggccgatgatggcgccggaggcggcgaggaagggtatggatgtgttgtcacagggatg
ccgaatcttgggaacacctgctacctgaacgcgctgctgcagtgcctccttgtgctccgg
aagctgcgggcgaggatcttggggccgggcgctccgtcgggtgtccttggtgacttgctg
catgatctctttgttggtacaaacggtccgagctacgctcgacgcctgctggacccggcg
atgctcttgcgttgtgtgcgctttcgttacccgcagttccgaggcatcgctatgcaggac
tgtcatgaattgctttgctgtttgcgcgatggtttggatgaggatgaaaggaaatggagg
gctggtaagatgcaacaaggtgctcctagtgctgtggctcctacggttattgattccata
tttgctggtcagctgtctgttaccttgtcttgcaaatgttgctcgtttaagtcagattca
gaggaggtattccatgatctctcaatgccattaccaccaaaggggactccagccagaagt
gttgcatcaccaccacggaatggaagatgcatatctcaacagaagactcgtatggaactg
tttccagcaatcaacaagactaacaccgaaaagattcatgcaatttctgaaggcggtgat
gctcaggttcccgcttcagaatcggaacatatggttatggtgaaaacatcagagcctttg
gaaattgattctaatcacttggaacagatttcgcaaagcaagggtgatgtacatggtcct
ttgcaggctccaacaagggaagagaacacgttgatagcatcaggccatggtgtagagaga
actgtcagtgctgttcttgatagcatcaagccagaagatagtatagaagccaagatggac
actttgtcagcagaagttgctacagaagacaaggggaaagatcgaaatcgtgatgcagtt
tatgataaggcagatgatatcaactctcttgcttcaatcgaggaaatattggaattgcat
ttaaaagcagagatgatagaaaagaggtgtgaaaactgttccaatgctgataagaaggca
agccctataagtggtaaacatggtgaacagccagtggcatgtaccaatgtgaatgggaca
gttgatggagaccaggatgaacaagatcagggaagggggaagcaagtaaatatgggtcat
agtgcacatcaagtggaagaaaaccaatatgatcggccagataggaacaaaggtgcaatt
aaaacatgtctttttagcaagttgccacctgtgttagccctccatctcaagagaaattta
tggcctcttaaacttaaagtgagtggacatgtgagctttaaggagacccttgatgtgaaa
ttgttcatgcaccccagttctgaggacaaagataattccagctaccgtctagttggtgtt
gttgagcacctgggcctttgcatggatgcagggcattttgttgcttatgtgagaccaagt
tgcccgcagcagaccaatggctcttccttatggttttgtgcaagtgatgccgacatcaga
gaagtctctttagaagaagttctcaagtgcgaagcttaccttcttttctatgagaggatt
gaaggctaa
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