Oryza glaberrima (African rice): 127781848
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Entry
127781848 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127781848
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127781848
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127781848
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127781848
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127781848
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127781848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
TEX19
Motif
Other DBs
NCBI-GeneID:
127781848
NCBI-ProteinID:
XP_052164871
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All DBs
Position
8:23234290..23236028
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AA seq
402 aa
AA seq
DB search
MDEESQPKSPSLERPAAATDANSGGGYRARHCRHVLYGEDDINLAIELIKTCDDTPMCNA
DNCDNTEGREISVCLDCESRFCTTHGKWHASINKHWVALVYKKPHVTYCFACEECYFIRT
ENFGEVMDNEEDDYFISFREEDEKGMRVDNEAGDHASGSVIGHACPIKGIPNLGNTCYLN
SLLQCLLVLGRLRAGILGLDAPLGLLGSSLRYLFDDADSVNNAGGLLDPEKLLACVRMLN
PEFKGNGMHDSQEALCILRTGLDKEERAMKLSNMQAGAPSAVAPTVIDSIFGGQLSVTSS
CKHCSVRSLSHDVFHDLSVPLPQKESPAKSVELSPWTKGHRSPRKIRIKLLSAIDKHKSD
NEKTHKISERGDSQSPASELEDVFLVKTSKPLKVGKLICSCA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagagccagccgaaatccccgagcctggagcggccagctgcagcgacagac
gccaattccggcggcggctaccgtgctcggcattgccggcacgtcttgtatggggaggat
gacattaatttggccatagaactgatcaagacctgcgatgacaccccaatgtgtaatgct
gacaattgtgacaatactgaggggagggaaatctcggtgtgcttggattgcgaatcgcgt
ttctgcactacacacgggaaatggcacgcctcgatcaacaagcattgggttgctttggtg
tacaaaaagccacatgtgacgtattgcttcgcgtgtgaagagtgctatttcatcagaact
gagaattttggggaggtaatggacaacgaggaggatgactatttcatcagtttccgtgag
gaggatgagaagggaatgagagttgacaatgaggcaggtgatcatgcatctgggtcagtt
attgggcatgcctgtcctattaaagggataccaaatcttggaaatacatgctacttgaat
tcattgctgcagtgcctccttgtgcttggaagactgcgggcagggatattaggactagat
gctccattggggctccttggtagctcactgcgatatctctttgatgatgcagacagtgta
aataatgcaggaggcctgctggacccagagaagctcttggcttgtgtacgcatgctgaac
ccagagtttaaaggcaatggtatgcatgatagccaggaagcactttgcattttgcgcact
ggtttggacaaggaggagagggcaatgaagctgtctaacatgcaagccggtgctcccagt
gcagtggctcctacagttattgattccatttttggcggtcagctgtctgttaccagttca
tgcaaacattgctcagttagatcactttcccatgatgtattccatgatctctcagtgcca
ctaccacagaaggagtctccagccaaaagtgttgaattatcaccatggactaaaggtcac
agatctccacggaagattcgtatcaagctgctttcagcaatagacaaacacaaaagtgac
aatgaaaagactcataaaatttctgaaagaggtgattctcagagtcctgcttcagaattg
gaagatgtgttcttggtgaaaacatcaaagcctttaaaagttggtaagcttatatgctca
tgtgcttaa
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