Oryza glaberrima (African rice): 127781859
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Entry
127781859 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127781859
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127781859
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127781859
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127781859
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127781859
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127781859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
127781859
NCBI-ProteinID:
XP_052164884
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All DBs
Position
8:complement(23284421..23289945)
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AA seq
834 aa
AA seq
DB search
MTRRRSRPRRFGAIPAYSSAMEEEKRARAAERDRAIVRSPRKGKAPRIEPLDADDSGWGG
DASLEVYREAAAVATRGGGGERCEHMTCSEHDVAEIVSKIASWGDPVCQDETCMCTERHL
MMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLTIGG
EEGDKGMKVKGEEGCRASGSDSGHGCVIGASGSGSGHGCAIRGIPNFGNTCYLNAVLQCL
LVLGKLRARMSGPDAPPPSGMLGIILHDLFVATESVSYTRDLLDPVMLLGCVRHYKSEFQ
GNTMQDSHELLCCLRDSLIEEESKTRPDNMQQDAPSAVVPTVIDSIFRGQLFVTTLCKYC
SFESVSQGSQDAFYDLCVALPLQNERCISQQKIAIEQFPTIDKTNTEKIHAISGGSDPQV
PASELGDMVMVKTSEPLVVDSNPLDQIAQSKDDVHCPLQSPIRKENVLITSDRELERTKS
AILDSIKPEDSIEAKMDTLSGEVTTEDKGKDRSCDVVYDEADDINSLASIEELLGLHFKE
MVEKRCENCSNVAQKASPISGKDGEQTVACTNVNRTVDGDQAEQSERKTCQSEQSSDLVR
LDGECSSSSRQPHVADAQHQVMPTEDTMTKGDISGMSHGEKDSSSFSIVNKKPECLECAQ
EDVPDCHLGEKPVNLSSGQCQNANTEDQGRRKQVNLHQVEENQYDQQDRNEGAIKTSLIS
KLPPVLVIQLKRHMGPIKVRRHVSFKEILDVGLFLHPSSEDKDNSSYRLVGVVEHLGPSM
YSGHYVAYVRPSPPQQTNGSSSWFWASDTDIREVSLEEVLKCEAYILFYERMEG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtcgccgatcgcgccctcgccgattcggagccatccccgcgtattccagcgcg
atggaagaggagaagagggcaagggcggcggaaagggatagggctatcgtcaggagcccg
cggaaagggaaagccccgcggatcgagccgctggatgcggatgattctggatggggcggc
gatgcctcgctggaggtgtacagggaggccgcggcggtggcaaccagaggcggcggcggc
gagcggtgcgagcacatgacctgcagcgagcatgacgttgcggaaatcgtgtccaagatt
gcgtcctggggcgacccggtgtgccaggatgaaacctgtatgtgcaccgagaggcacctc
atgatggtgtgcgtggaatgcgatatgcatttctgcattggaaggtttgccaagaagtct
aagccgcgaggacacatcgaggagcatgcgttcgacgatgggcatccggttgcgctgtgg
tacgaagatccgtatactggttactgctttgagtgtgaggatcccttgaccattggtggt
gaggagggtgataagggaatgaaggtcaaaggcgaggaaggctgtcgcgcatctgggtct
gatagtgggcatggctgtgtcatcggcgcatctgggtctggtagtgggcatggctgtgcc
atcagagggataccgaattttggaaacacttgctacttgaatgcggtgttgcagtgcctc
cttgtgcttggaaagctgcgggcaaggatgtctggaccggacgctccgcctccatcgggg
atgcttggtataatactgcatgatctctttgttgctacagaaagtgtgagctatacacga
gacctgctggacccggtgatgctcttgggttgtgtgcgccactataaatcagagttccaa
ggcaatactatgcaagacagccatgaattgctttgctgtttgcgtgatagtttgattgag
gaggaaagtaaaacgaggcctgataacatgcaacaggatgctcctagtgctgtggttcct
acagttattgattccatatttcgtggtcagctgtttgttaccactctgtgcaaatattgc
tcatttgagtcagtttcacagggttcacaggatgcattctatgacctctgtgtggcatta
ccactacagaatgaaagatgcatatctcaacagaagattgccatcgaacaatttccaaca
attgacaagactaacaccgaaaagattcatgcaatttctggaggcagtgatcctcaggtt
cccgcttcagaattgggagatatggtcatggtgaaaacatcagagcctttggtagttgat
tctaacccattggaccagatcgcacaaagcaaggatgatgtacattgtcctttgcagagt
ccaataaggaaggagaatgtgctgataacatcagaccgtgaattagagagaactaagagt
gctattcttgatagcatcaagccagaagatagtatagaagccaagatggacactttgtca
ggagaagttactacagaagacaaggggaaagatcgaagttgtgatgtagtttatgatgag
gcagatgatatcaactctcttgcatcaattgaggagttattgggattgcatttcaaagag
atggtagaaaagaggtgtgagaactgttccaatgtcgctcagaaggcaagccctataagt
ggtaaagatggtgaacagacggtggcatgtaccaatgtgaataggacagttgatggagac
caggctgaacagtcagagaggaaaacatgccaaagtgagcaatctagcgatttggtcaga
ttggatggggaatgcagttcttcaagtaggcagccacatgttgctgatgcacagcatcaa
gttatgccaacagaggacactatgaccaaaggagacatttcagggatgagtcacggtgaa
aaagactcatcctctttcagcatagtcaataaaaaacctgaatgtcttgagtgtgcccaa
gaagatgtacctgactgccatctaggtgagaagccagtcaacctgtcgagtggccagtgc
caaaatgccaacactgaagatcagggaaggaggaagcaagtaaatctacaccaagtggaa
gaaaaccaatatgatcagcaagataggaacgaaggtgcgattaagacatctcttattagc
aagctgccacctgtgttagtcatccagctcaagagacatatggggcctattaaagtgagg
cgacacgtgagcttcaaggagatccttgatgtgggactgttcctgcaccccagttctgag
gacaaagataattccagctatcgtctagttggtgttgttgagcacctgggccctagcatg
tattcagggcattatgttgcttatgtgagaccaagtcctccgcagcagactaatggctct
tcctcatggttttgggcaagtgacaccgacatcagagaagtctctttagaagaagtactc
aagtgcgaggcttacattcttttctatgagcggatggaaggctaa
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