Oryza glaberrima (African rice): 127781860
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Entry
127781860 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127781860
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127781860
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127781860
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127781860
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127781860
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127781860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
127781860
NCBI-ProteinID:
XP_052164885
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Position
8:complement(23313998..23319151)
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AA seq
750 aa
AA seq
DB search
MDDEKRPRVGDTAESPRKSPRLVHRIPTTTDQAESGVGLKSLLGLIKNNPSKELDDPNAA
SLGVIDVEKKAARPGDTAATALDVNDWWEKVVALQWMASVGGDCRARRCRHVLYGEDDIN
LAIALIKTCDDTPMCNADNCDNTEGREISVCLDCESRFCTTHGKWHASINKHWVALVYKK
PHVAYCFACEECYFIRTEHFGVVMDNEDDYFISLREEDEKGMRVDNVAGDHASGSVIGHA
CPIKGIPNLGNTCYLNSLLQCLLVLGRLRAGILGLDAPLGLLGSSLRSLFDDADSVNNAG
GLLDPEKLLSCVRMLNPEFKGNGMHDSQEALCILRTGLDKEERAMKLSNMQAGAPSAVAP
TVIDSIFGGQLSVTSSCKHCSVRSLSHDVFHDLSVPLPQESPAKSDELSPWTKGRRSPRK
IRINLLSAIDKHKSDNEKTQSPASELEDVFLVKRSKPLKVDSTKVEQISHSMDAGGPLQT
RKDKVQGKVVDVLPRIPEDPASPSFVSPLSEEKNDTAVQPEVSTEAKMTASSAKVTTKDK
GKTQISDVVYDKAHDINSLASIEKCLELYLETEIEWTCENCSKVLKKPGIMSSTKEDTTA
GDQSEQLEKSAHQVEENQNEQKDKNECPIQTRLIRKLPPVLTIHLMRYLEDLTKVIGHVS
FKEILDVGQFMDPSSEDRDNSRYRLVGFVEHLGPSMYAGHYVAYVRPSPPQQTNGSSSWF
RASDTDITEVSLEEVLKREAYLLFYERIEG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagaagaggccgagggtgggggatactgccgagagcccgcggaaatccccg
cgcctggtgcaccgaattccgacgacgacagatcaggccgaatctggagtcggtctcaag
tccttgcttgggttgatcaaaaacaatccgagcaaggagctcgatgacccaaatgctgcc
tctctcggcgtgatagacgtggagaagaaggcagcaaggccaggggatactgcggcaacg
gcgctggatgtgaacgattggtgggagaaagtcgtggcgttacaatggatggcatcggtc
ggcggcgactgccgtgctcggcggtgccggcacgtcttgtatggggaggatgacattaat
ttggccatagcactgatcaagacctgcgatgacaccccaatgtgtaatgctgacaattgt
gacaatactgaggggagggaaatctcggtgtgcttggattgcgaatcgcgtttctgcact
acacacgggaaatggcacgcctcgatcaacaagcattgggttgctttggtgtacaaaaag
ccacatgtggcgtattgcttcgcgtgtgaagagtgctatttcatcagaactgagcatttt
ggggtggtaatggacaacgaggatgactatttcatcagtttacgtgaggaggatgagaag
ggaatgagagttgacaatgtggcaggtgatcatgcatctgggtcagttattgggcatgcc
tgtcctattaaagggataccgaatcttggaaatacatgctacttgaattcattgctgcag
tgcctccttgtgcttggaagactgcgggcagggatattaggactagatgctccattgggg
ctccttggtagctcactgcgatctctctttgatgatgcagacagtgtaaataatgcagga
ggcctgctggacccagagaagctcttgtcttgtgtacgcatgctgaacccagagtttaaa
ggcaatggtatgcatgatagccaggaagcactttgcattttgcgcactggtttggacaag
gaggagagggcaatgaagctgtctaacatgcaagccggtgctcccagtgcagtggctcct
acagttattgattccatttttggcggtcagctgtctgttaccagttcatgcaaacattgc
tcagttagatcactttcccatgatgtattccatgatctctcagtgccactaccacaggag
tctccagccaaaagtgatgaattatcaccatggactaaaggtcgcagatctccacggaag
attcgtatcaacctgctttcagcaatagacaaacacaaaagtgacaatgaaaagactcag
agtcctgcttcagaattggaagatgtgttcttggtgaaaagatcaaagcctttaaaagtt
gattctaccaaagtggaacagatatctcatagcatggatgcaggtggtcctttgcagact
agaaaggataaggtccaaggaaaggttgttgatgtccttccccgcattccagaagatcct
gcttcaccatcatttgtttctccactaagcgaagagaaaaatgacactgctgttcaacca
gaggttagtacagaagccaagatgaccgcttcctcagcaaaagttactacaaaagacaag
gggaaaactcagattagcgatgttgtttatgacaaggcacatgatatcaactctcttgca
tcgattgagaaatgcttggaattgtatcttgaaacagagatagaatggacctgtgagaac
tgctccaaagttcttaagaagccaggcatcatgtcaagtactaaggaggacacaacagct
ggagaccagagtgaacagttagagaagagtgcacaccaagtggaagaaaaccaaaatgag
cagaaagataagaatgaatgtcccattcaaacacgtcttattcgcaagttgccacctgta
ttgaccattcatctgatgagatatttggaggatttaacgaaggtgataggacatgtgagc
tttaaggaaatccttgatgtggggcagttcatggatcccagctctgaggacagagacaat
tcccgctatcgtctagttggttttgttgagcacctgggccctagcatgtatgcagggcat
tatgttgcttatgtgagaccaagtcctccgcagcagaccaatggctcttcctcatggttt
cgtgcaagtgataccgatatcacagaagtctctttagaagaagttctcaagcgcgaggct
taccttcttttctatgagaggattgaaggctaa
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